RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 MED17Q9NVC6 651 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 IL20Q9NYY1 176 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 SLC13A4Q9UKG4 626 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 GPR55Q9Y2T6 319 aaPredicted RBP11.52□□□□□ -0.56
NPC1-202ENST00000540608 ASB4Q9Y574 426 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 CPSF4LA6NMK7 179 aaKnown RBP11.52□□□□□ -0.57
NPC1-202ENST00000540608 PGRMC2O15173 223 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 EFCAB14O75071 495 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 ERAL1O75616 437 aaKnown RBP11.52□□□□□ -0.57
NPC1-202ENST00000540608 CH25HO95992 272 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 ADH5P11766 374 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 GNSP15586 552 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 FPR3P25089 353 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 HTR1FP30939 366 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 PTGER1P34995 402 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 TRIM23P36406 574 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 INPP1P49441 399 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 RRAS2P62070 204 aaPredicted RBP11.52□□□□□ -0.57
NPC1-202ENST00000540608 ADAMTSL4Q6UY14 1074 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 CCDC116Q8IYX3 515 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 CADM2Q8N3J6 435 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 LINC01555Q8NAE3 123 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 DEDD2Q8WXF8 326 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 OTULINQ96BN8 352 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 GTPBP2Q9BX10 602 aaKnown RBP11.52□□□□□ -0.57
NPC1-202ENST00000540608 JAM3Q9BX67 310 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 CRISPLD2Q9H0B8 497 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 KLHL31Q9H511 634 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 TM7SF3Q9NS93 570 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 PRKAG2Q9UGJ0 569 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 PHF11Q9UIL8 331 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 SLC27A6Q9Y2P4 619 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.52□□□□□ -0.57
NPC1-202ENST00000540608 CDH10Q9Y6N8 788 aa11.52□□□□□ -0.57
NPC1-202ENST00000540608 ERVH48-1M5A8F1 160 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 NDUFB5O43674 189 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 IFNA8P32881 189 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 TRHRP34981 398 aaPredicted RBP11.51□□□□□ -0.57
NPC1-202ENST00000540608 CTBP2P56545 445 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 HTRA4P83105 476 aaPredicted RBP11.51□□□□□ -0.57
NPC1-202ENST00000540608 C19orf57Q0VDD7 668 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 ADAM15Q13444 863 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 INSL4Q14641 139 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 DECR1Q16698 335 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 HNRNPA1L2Q32P51 320 aaKnown RBP11.51□□□□□ -0.57
NPC1-202ENST00000540608 EOGTQ5NDL2 527 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 VASNQ6EMK4 673 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 KIAA1161Q6NSJ0 714 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 SLC30A6Q6NXT4 461 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 TMEM91Q6ZNR0 172 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 ADCK2Q7Z695 626 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 VRK2Q86Y07 508 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 SFTPA1Q8IWL2 248 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 TTLQ8NG68 377 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 ACOT12Q8WYK0 555 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 ZG16BQ96DA0 208 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 SLC38A1Q9H2H9 487 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 IGKV1-8A0A0C4DH67 115 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 EDDM13A0A1B0GTR0 161 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 C2orf92A0A1B0GVN3 265 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 A0A1W2PR48 441 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 CD8B2A6NJW9 211 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 FRS3O43559 492 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 NTN1O95631 604 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 ALPPL2P10696 532 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 CD8BP10966 210 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 ARSBP15848 533 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 HTR2BP41595 481 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 GPLD1P80108 840 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 PRDX1Q06830 199 aaKnown RBP11.51□□□□□ -0.57
NPC1-202ENST00000540608 TGM3Q08188 693 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 ZIC1Q15915 447 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 ZNF750Q32MQ0 723 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 ZNF791Q3KP31 576 aaPredicted RBP11.51□□□□□ -0.57
NPC1-202ENST00000540608 FNDC3BQ53EP0 1204 aaKnown RBP11.51□□□□□ -0.57
NPC1-202ENST00000540608 PIP5KL1Q5T9C9 394 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 ZNF322Q6U7Q0 402 aaPredicted RBP11.51□□□□□ -0.57
NPC1-202ENST00000540608 ACOT11Q8WXI4 607 aaPredicted RBP11.51□□□□□ -0.57
NPC1-202ENST00000540608 RSPRY1Q96DX4 576 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 CNRIP1Q96F85 164 aaPredicted RBP11.51□□□□□ -0.57
NPC1-202ENST00000540608 OR7D2Q96RA2 312 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 UBL7Q96S82 380 aaPredicted RBP11.51□□□□□ -0.57
NPC1-202ENST00000540608 SECISBP2Q96T21 854 aaKnown RBP11.51□□□□□ -0.57
NPC1-202ENST00000540608 IRF2BPLQ9H1B7 796 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 CBLCQ9ULV8 474 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 CHST2Q9Y4C5 530 aa11.51□□□□□ -0.57
NPC1-202ENST00000540608 DNMT3AQ9Y6K1 912 aaPredicted RBP11.51□□□□□ -0.57
NPC1-202ENST00000540608 A0A0G2JMP0 313 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 LOC102723532A0A0G2JNH3 316 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 ISM1B1AKI9 464 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 RNF144AP50876 292 aaPredicted RBP11.5□□□□□ -0.57
NPC1-202ENST00000540608 RAB25P57735 213 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 PRR5P85299 388 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 DUSP2Q05923 314 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 ELAVL3Q14576 367 aaKnown RBP11.5□□□□□ -0.57
NPC1-202ENST00000540608 TMEM107Q6UX40 140 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 CXorf40AQ8TE69 158 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 POF1BQ8WVV4 589 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 KLK6Q92876 244 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 CREB3L1Q96BA8 519 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms