RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 ZNF275Q9NSD4 429 aaPredicted RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 FOXJ2Q9P0K8 574 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 TMEM9Q9P0T7 183 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SLC17A6Q9P2U8 582 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 DHCR7Q9UBM7 475 aaKnown RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 TNFRSF10DQ9UBN6 386 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 DIMT1Q9UNQ2 313 aaKnown RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 WASF3Q9UPY6 502 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 ANGPT4Q9Y264 503 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 ST14Q9Y5Y6 855 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 A0A096LPI6 279 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 LOC105369274A0A096LPK9 316 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 LOC102723532A0A0G2JNH3 316 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 LOC101059948A0A1B0GTJ6 334 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 A0A1B0GUH1 482 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 HMX2A2RU54 273 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 OR5H15A6NDH6 313 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 FRG2CA6NGY1 282 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 ARGFXA6NJG6 315 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF98A6NK75 572 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 H0YJX3 145 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 M0R3G1 203 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 BCKDKO14874 412 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 PIP5K1BO14986 540 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 FOXS1O43638 330 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 AKAP8O43823 692 aaKnown RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 MAN1A2O60476 641 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SNNO75324 88 aaPredicted RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 CDC123O75794 336 aaPredicted RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 CEACAM4O75871 244 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 ALX3O95076 343 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SIX3O95343 332 aaPredicted RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 DDAH2O95865 285 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 NGFRP08138 427 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 CERS1P27544 350 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 CA5AP35218 305 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 EIF1P41567 113 aaKnown RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 OR1D4P47884 311 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 CPA2P48052 419 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 NCBP2P52298 156 aaKnown RBP eCLIP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SMSP52788 366 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SMIM11AP58511 58 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 PLGLB1Q02325 96 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 KCNAB1Q14722 419 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 LARS2Q15031 903 aaKnown RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 GALNTL6Q49A17 601 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 XKR7Q5GH72 579 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 MTX3Q5HYI7 312 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 FRMPD2BQ6IN97 320 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 FAM71E1Q6IPT2 247 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SLC25A25Q6KCM7 469 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 C11orf88Q6PI97 169 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 ENPP6Q6UWR7 440 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 C16orf89Q6UX73 402 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SH2D5Q6ZV89 423 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 ASB18Q6ZVZ8 466 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 CCDC28AQ8IWP9 274 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 OR4N4Q8N0Y3 316 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SPATA6LQ8N4H0 392 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 CCDC197Q8NCU1 140 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 OR8J2Q8NGG1 315 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 OR56B2PQ8NGI1 322 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 OR2W6PQ8NHA6 318 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SARAFQ96BY9 339 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 THOC3Q96J01 351 aaKnown RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 LCORQ96JN0 433 aaPredicted RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SLC35G5Q96KT7 338 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF597Q96LX8 424 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 ZFP3Q96NJ6 502 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SPSB2Q99619 263 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 FAM173AQ9BQD7 235 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 CNPPD1Q9BV87 410 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SPACA1Q9HBV2 294 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 DUSP22Q9NRW4 184 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 STX18Q9P2W9 335 aaKnown RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 GRHPRQ9UBQ7 328 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 C19orf53Q9UNZ5 99 aaPredicted RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SLC35A3Q9Y2D2 325 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 RAXQ9Y2V3 346 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 ARL2BPQ9Y2Y0 163 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 PCYT1BQ9Y5K3 369 aaPredicted RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 CABIN1Q9Y6J0 2220 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 BAHCC1Q9P281 2608 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 IGHV1-45A0A0A0MS14 117 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 WDR91A4D1P6 747 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 GMNCA6NCL1 334 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 CCDC154A6NI56 674 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 PLPP1O14494 284 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 TO15178 435 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 EDF1O60869 148 aaKnown RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 AIFM1O95831 613 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 FAM107AO95990 144 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 MYF5P13349 255 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 GABRA1P14867 456 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 NQO1P15559 274 aaKnown RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF28P17035 718 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 ATF4P18848 351 aaPredicted RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SOAT1P35610 550 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 GNG2P59768 71 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 IFITM2Q01629 132 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms