RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 PANX1Q96RD7 426 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 RSPO3Q9BXY4 272 aaPredicted RBP11.99□□□□□ -0.49
CHFR-216ENST00000538235 OR51I1Q9H343 314 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 VAPAQ9P0L0 249 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 CBLCQ9ULV8 474 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 MAPRE3Q9UPY8 281 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 CFL2Q9Y281 166 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 FLNCQ14315 2725 aa11.99□□□□□ -0.49
CHFR-216ENST00000538235 HELZ2Q9BYK8 2649 aaKnown RBP11.98□□□□□ -0.49
CHFR-216ENST00000538235 GMNCA6NCL1 334 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 OR6C70A6NIJ9 312 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 TTLL8A6PVC2 850 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 FAM166BA8MTA8 275 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 OIP5O43482 229 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 FADS1O60427 444 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 SHOX2O60902 331 aaPredicted RBP11.98□□□□□ -0.49
CHFR-216ENST00000538235 BCAS1O75363 584 aaPredicted RBP11.98□□□□□ -0.49
CHFR-216ENST00000538235 TRIM3O75382 744 aaPredicted RBP11.98□□□□□ -0.49
CHFR-216ENST00000538235 REM1O75628 298 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 UNC5CO95185 931 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 WISP1O95388 367 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 IL33O95760 270 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 IL6P05231 212 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 NUDT7P0C024 238 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 CD46P15529 392 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 UQCRC2P22695 453 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 RFX3P48380 749 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 STX1BP61266 288 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 PRR5P85299 388 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 MRPL49Q13405 166 aaKnown RBP11.98□□□□□ -0.49
CHFR-216ENST00000538235 GRAMD1BQ3KR37 738 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 SPDYE7PQ495Y7 208 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 LRIF1Q5T3J3 769 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 ANXA8L1Q5VT79 327 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 MSANTD1Q6ZTZ1 278 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 HMGN2P46Q86SG4 172 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 TAGAPQ8N103 731 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 NATD1Q8N6N6 113 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 POGLUT1Q8NBL1 392 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 MIPOL1Q8TD10 442 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 GPR151Q8TDV0 419 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 DIO2Q92813 273 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 ZNF524Q96C55 264 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 COL21A1Q96P44 957 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 ZBTB18Q99592 522 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 ACTRT3Q9BYD9 372 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 TTTY12Q9BZ98 90 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 MYLK2Q9H1R3 596 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 PIGUQ9H490 435 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 RUBCNLQ9H714 662 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 C3orf14Q9HBI5 128 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 SACM1LQ9NTJ5 587 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 PCDHB14Q9Y5E9 798 aa11.98□□□□□ -0.49
CHFR-216ENST00000538235 PRAMEF25A6NGN4 478 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 NPIPB9F8W1W9 429 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 HMGN4O00479 90 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 RFXANKO14593 260 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 RASAL1O95294 804 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 OR12D1P0DN82 309 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 NAGAP17050 411 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 ENDOUP21128 410 aaKnown RBP11.97□□□□□ -0.49
CHFR-216ENST00000538235 FOXK1P85037 733 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 CD226Q15762 336 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 CMPK2Q5EBM0 449 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 HEPHL1Q6MZM0 1159 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 ZNF621Q6ZSS3 439 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 PIGWQ7Z7B1 504 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 SPPL2CQ8IUH8 684 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 TMEM251Q8N6I4 163 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 POU5F2Q8N7G0 328 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 COX18Q8N8Q8 333 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 WDSUB1Q8N9V3 476 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 TMEM178AQ8NBL3 297 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 OR52N2Q8NGI0 321 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 OR4C3Q8NH37 302 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 FAR1Q8WVX9 515 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 NR4A3Q92570 626 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 SGCZQ96LD1 299 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 STACQ99469 402 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 NPAS1Q99742 590 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 CPPED1Q9BRF8 314 aaPredicted RBP11.97□□□□□ -0.49
CHFR-216ENST00000538235 SLC39A3Q9BRY0 314 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 CCDC106Q9BWC9 280 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 ANGPTL4Q9BY76 406 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 ZNF703Q9H7S9 590 aaPredicted RBP11.97□□□□□ -0.49
CHFR-216ENST00000538235 IL1RL2Q9HB29 575 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 Q9N2J8 555 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 TIMMDC1Q9NPL8 285 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 DUSP22Q9NRW4 184 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 GIN1Q9NXP7 522 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 KLF13Q9Y2Y9 288 aaPredicted RBP11.97□□□□□ -0.49
CHFR-216ENST00000538235 OR10H1Q9Y4A9 318 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 ARHGAP21Q5T5U3 1957 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 POLEQ07864 2286 aa11.97□□□□□ -0.49
CHFR-216ENST00000538235 ESPL1Q14674 2120 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 A0A096LPI6 279 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 A0A1W2PP18 115 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 CDK2AP1O14519 115 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 SCO2O43819 266 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 HS6ST1O60243 411 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms