RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 THBS1P07996 1170 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 ENDOUP21128 410 aaKnown RBP10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 IFITM3Q01628 133 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 ATP1A4Q13733 1029 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 SPHARQ15513 63 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 SNAPC1Q16533 368 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 ZNF542PQ5EBM4 170 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 SLC27A4Q6P1M0 643 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 TAF8Q7Z7C8 310 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 SLC34A3Q8N130 599 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 CSNK1A1LQ8N752 337 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 TMEM52Q8NDY8 209 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 FLCNQ8NFG4 579 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 PIGXQ8TBF5 258 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 TEX47Q8TBZ9 253 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 TMEM163Q8TC26 289 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 LRR1Q96L50 414 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 MND1Q9BWT6 205 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 ZNF350Q9GZX5 532 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 SAP130Q9H0E3 1048 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 RNF167Q9H6Y7 350 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 HHATLQ9HCP6 504 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 DIMT1Q9UNQ2 313 aaKnown RBP10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 CYP8B1Q9UNU6 501 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 MTCH2Q9Y6C9 303 aa10.66□□□□□ -0.7
SLC28A1-204ENST00000538177 SZT2Q5T011 3432 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 OR5K3A6NET4 321 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 KLF4O43474 513 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 LDB3O75112 727 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 CSO75390 466 aaKnown RBP10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 THEGLP0DJG4 465 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 CKMT1AP12532 417 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 RPS4Y1P22090 263 aaKnown RBP10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 FPR3P25089 353 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 CD40LGP29965 261 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 NUDT1P36639 197 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 STAT5AP42229 794 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 PPP5CP53041 499 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 GAS1P54826 345 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 EEF1A1P68104 462 aaKnown RBP10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 HOXC5Q00444 222 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 ID2Q02363 134 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 MGAT2Q10469 447 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 OXA1LQ15070 435 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 ZCCHC12Q6PEW1 402 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 TUBA3EQ6PEY2 450 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 ZNF836Q6ZNA1 936 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 GDPGP1Q6ZNW5 385 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 PLEKHM3Q6ZWE6 761 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 RRM2BQ7LG56 351 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 GDF7Q7Z4P5 450 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 NKAIN4Q8IVV8 208 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 RBM12BQ8IXT5 1001 aaKnown RBP10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 CA13Q8N1Q1 262 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 FRMD1Q8N878 549 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 OR52I1Q8NGK6 324 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 OR8D4Q8NGM9 314 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 SLC41A3Q96GZ6 507 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 STACQ99469 402 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 EGLN3Q9H6Z9 239 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 CACYBPQ9HB71 228 aaKnown RBP10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 DUSP22Q9NRW4 184 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 RHBDL2Q9NX52 303 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 WSB2Q9NYS7 404 aaPredicted RBP10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 SATB2Q9UPW6 733 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 NTNG1Q9Y2I2 539 aa10.65□□□□□ -0.7
SLC28A1-204ENST00000538177 TAF4O00268 1085 aa10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 GPX5O75715 221 aa10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 UBXN7O94888 489 aa10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 ALOX5P09917 674 aa10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 MAP3K8P41279 467 aa10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 ZNF136P52737 540 aa10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 PRICKLE4Q2TBC4 344 aa10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 EIPR1Q53HC9 387 aa10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 Q6ZS52 159 aa10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 MBOAT2Q6ZWT7 520 aa10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 OOSP2Q86WS3 158 aa10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 MEX3DQ86XN8 651 aaKnown RBP10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 SHISA5Q8N114 240 aa10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 CDRT4Q8N9R6 151 aa10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 OR5T3Q8NGG3 340 aa10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 ADAP2Q9NPF8 381 aa10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 CNIH4Q9P003 139 aa10.65□□□□□ -0.71
SLC28A1-204ENST00000538177 A0A1W2PPC4 97 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 H3BQ06 376 aaPredicted RBP10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 PRODHO43272 600 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 KIAA0513O60268 411 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 STX11O75558 287 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 NTN1O95631 604 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 RAB36O95755 333 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 HBQ1P09105 142 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 CTSEP14091 401 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 NT5EP21589 574 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 RANBP1P43487 201 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 PSMD7P51665 324 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 VSX2P58304 361 aaPredicted RBP10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 PPP1CAP62136 330 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 SHC2P98077 582 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 HHEXQ03014 270 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms