RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 DCLRE1CQ96SD1 692 aaKnown RBP13.4□□□□□ -0.26
USP44-203ENST00000537435 ANKRD19PQ9H560 264 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 C6orf106Q9H6K1 298 aaPredicted RBP13.4□□□□□ -0.26
USP44-203ENST00000537435 KLHL28Q9NXS3 571 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 IL20RAQ9UHF4 553 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 TRDV1A0A1B0GX56 115 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 CCDC182A6NF36 153 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 SEC14L5O43304 696 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 THY1P04216 161 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 ASGR2P07307 311 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 S100A1P23297 94 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 FPR3P25089 353 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 STAT5AP42229 794 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 BTN3A2P78410 334 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 CEBPEQ15744 281 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 SLC35F1Q5T1Q4 408 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 PPP2R2DQ66LE6 453 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 GET4Q7L5D6 327 aaPredicted RBP13.4□□□□□ -0.26
USP44-203ENST00000537435 LSRQ86X29 649 aaPredicted RBP13.4□□□□□ -0.26
USP44-203ENST00000537435 NRMQ8IXM6 262 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 MFSD9Q8NBP5 474 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 ATP6V1C2Q8NEY4 427 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 ADAMTS15Q8TE58 950 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 OSTF1Q92882 214 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 BADQ92934 168 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 RFKQ969G6 155 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 KIAA1143Q96AT1 154 aaPredicted RBP13.4□□□□□ -0.26
USP44-203ENST00000537435 SLC35A4Q96G79 324 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 MCHR1Q99705 422 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 TMED9Q9BVK6 235 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 ACTRT3Q9BYD9 372 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 DOCK9Q9BZ29 2069 aa13.4□□□□□ -0.26
USP44-203ENST00000537435 RSPH9Q9H1X1 276 aaPredicted RBP13.4□□□□□ -0.26
USP44-203ENST00000537435 HMX3A6NHT5 357 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 AGRPO00253 132 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 PIP5K1CO60331 668 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 CSF2P04141 144 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 TEAD1P28347 426 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 CMPK1P30085 196 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 PRKAR1BP31321 381 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 ARFIP1P53367 373 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 DECR1Q16698 335 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 C2orf27AQ580R0 203 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 TMEM240Q5SV17 173 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 C6orf132Q5T0Z8 1188 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 TANGO2Q6ICL3 276 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 PSRC1Q6PGN9 363 aaPredicted RBP13.39□□□□□ -0.27
USP44-203ENST00000537435 FAM111BQ6SJ93 734 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 NRROSQ86YC3 692 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 RDH10Q8IZV5 341 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 VWA5B2Q8N398 1253 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 BBS1Q8NFJ9 593 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 TMEM255BQ8WV15 326 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 FCRL4Q96PJ5 515 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 SNX18Q96RF0 628 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 SARGQ9BW04 601 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 HDHD5Q9BXW7 423 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 TBC1D17Q9HA65 648 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 IL20Q9NYY1 176 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 CENPXA8MT69 81 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 ISM1B1AKI9 464 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 B4DXG7 233 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 PLA2G10O15496 165 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 SLC2A10O95528 541 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 CELP19835 753 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 PTNP21246 168 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 APEX1P27695 318 aaKnown RBP13.39□□□□□ -0.27
USP44-203ENST00000537435 TSFMP43897 325 aaKnown RBP13.39□□□□□ -0.27
USP44-203ENST00000537435 STXBP1P61764 594 aaKnown RBP13.39□□□□□ -0.27
USP44-203ENST00000537435 PPP3R1P63098 170 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 MRPS15P82914 257 aaKnown RBP13.39□□□□□ -0.27
USP44-203ENST00000537435 ZNF155Q12901 538 aaPredicted RBP13.39□□□□□ -0.27
USP44-203ENST00000537435 RUNX3Q13761 415 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 DSG2Q14126 1118 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 RPE65Q16518 533 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 PGGHGQ32M88 737 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 ZNF791Q3KP31 576 aaPredicted RBP13.39□□□□□ -0.27
USP44-203ENST00000537435 DGLUCYQ7Z3D6 616 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 GDF7Q7Z4P5 450 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 KCT2Q8NC54 265 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 SLC16A11Q8NCK7 471 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 SLC41A3Q96GZ6 507 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 TEX12Q9BXU0 123 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 NDRG2Q9UN36 371 aaKnown RBP13.39□□□□□ -0.27
USP44-203ENST00000537435 SLC17A4Q9Y2C5 497 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 CSNK1G3Q9Y6M4 447 aa13.39□□□□□ -0.27
USP44-203ENST00000537435 PRR19A6NJB7 356 aa13.38□□□□□ -0.27
USP44-203ENST00000537435 TRAPPC2P0DI81 140 aa13.38□□□□□ -0.27
USP44-203ENST00000537435 TRAPPC2BP0DI82 140 aa13.38□□□□□ -0.27
USP44-203ENST00000537435 C5AR1P21730 350 aa13.38□□□□□ -0.27
USP44-203ENST00000537435 SOX9P48436 509 aa13.38□□□□□ -0.27
USP44-203ENST00000537435 ERVK-21P61565 698 aa13.38□□□□□ -0.27
USP44-203ENST00000537435 SGCGQ13326 291 aa13.38□□□□□ -0.27
USP44-203ENST00000537435 INSL4Q14641 139 aa13.38□□□□□ -0.27
USP44-203ENST00000537435 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.38□□□□□ -0.27
USP44-203ENST00000537435 TJAP1Q5JTD0 557 aa13.38□□□□□ -0.27
USP44-203ENST00000537435 ZNF425Q6IV72 752 aa13.38□□□□□ -0.27
USP44-203ENST00000537435 FRRS1Q6ZNA5 592 aa13.38□□□□□ -0.27
USP44-203ENST00000537435 ZNF620Q6ZNG0 422 aa13.38□□□□□ -0.27
USP44-203ENST00000537435 MTSS1LQ765P7 747 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms