RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 ZFP41Q8N8Y5 198 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 OR9A4Q8NGU2 314 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 FRZBQ92765 325 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 DIO2Q92813 273 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 SNAPC3Q92966 411 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 UTP4Q969X6 686 aaKnown RBP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 ZNF578Q96N58 590 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 CNTNAP3BQ96NU0 1288 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 RANBP9Q96S59 729 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 FIZ1Q96SL8 496 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 HAO2Q9NYQ3 351 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 MRPL15Q9P015 296 aaKnown RBP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 ZNF225Q9UK10 706 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 CNOT11Q9UKZ1 510 aaKnown RBP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 ENPP4Q9Y6X5 453 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 ZNF705FA8MVS1 300 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 SYT7O43581 403 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 PRAF2O60831 178 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 ZNF705DP0CH99 300 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 ZNF705BP0CI00 300 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 MAOAP21397 527 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 CEACAM7Q14002 265 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 FGFBP1Q14512 234 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 FIGNL1Q6PIW4 674 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 ZNF704Q6ZNC4 412 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 LARP4Q71RC2 724 aaKnown RBP eCLIP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 C14orf80Q86SX3 495 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 ZNF695Q8IW36 515 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 OR52N2Q8NGI0 321 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 OR10T2Q8NGX3 314 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 TXNDC15Q96J42 360 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 KCNJ16Q9NPI9 418 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 SEC14L5O43304 696 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 PEX14O75381 377 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 NDUFB2O95178 105 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 S1PR4O95977 384 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 APOFQ13790 326 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 SMYD5Q6GMV2 418 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 NIPAL3Q6P499 406 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 PLBD1Q6P4A8 553 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 IGDCC3Q8IVU1 814 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 SPTSSAQ969W0 71 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 PAPOLGQ9BWT3 736 aaKnown RBP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 GPN2Q9H9Y4 310 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 GCM1Q9NP62 436 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 A0A1W2PQU0 124 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 SHOXO15266 292 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 LYRM1O43325 122 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 HSD17B1P14061 328 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 AQP2P41181 271 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 ZNF169Q14929 603 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-209ENST00000537178 PLGLAQ15195 96 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 TCTE1Q5JU00 501 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 OR4C11Q6IEV9 310 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 CYP4V2Q6ZWL3 525 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-209ENST00000537178 CYS1Q717R9 158 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 UEVLDQ8IX04 471 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 OR5D16Q8NGK9 328 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 TOMM40LQ969M1 308 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 ECHDC3Q96DC8 303 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 TMEM19Q96HH6 336 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 COQ10AQ96MF6 247 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 ZNF587Q96SQ5 575 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-209ENST00000537178 BCAS3Q9H6U6 928 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 TEX10Q9NXF1 929 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-209ENST00000537178 IL20RAQ9UHF4 553 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 KIF25Q9UIL4 384 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 ATXN7L1Q9ULK2 861 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-209ENST00000537178 FBXO7Q9Y3I1 522 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 A0A1W2PP55 124 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 FAM230AA0A1W2PPH8 454 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 SCAMP2O15127 329 aaKnown RBP10.09□□□□□ -0.79
CLIP1-209ENST00000537178 HTR3BO95264 441 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 PENKP01210 267 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-209ENST00000537178 ALDOAP04075 364 aaKnown RBP10.09□□□□□ -0.79
CLIP1-209ENST00000537178 CHRNB1P11230 501 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 DRD5P21918 477 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 ZNF280AP59817 542 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-209ENST00000537178 LCN8Q6JVE9 175 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 TMEM150AQ86TG1 271 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 VWA5B2Q8N398 1253 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 ZNF808Q8N4W9 903 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-209ENST00000537178 DEFB119Q8N690 84 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 SLC2A12Q8TD20 617 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 DDIT4LQ96D03 193 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 PEBP4Q96S96 227 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 COCHO43405 550 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 DENRO43583 198 aaKnown RBP10.09□□□□□ -0.79
CLIP1-209ENST00000537178 RAB3DO95716 219 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 CPNE6O95741 557 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 LPLP06858 475 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 OSMP13725 252 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 JUNDP17535 347 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 SOX3P41225 446 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 NCS1P62166 190 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 RPP30P78346 268 aaKnown RBP10.09□□□□□ -0.79
CLIP1-209ENST00000537178 MRPS10P82664 201 aaKnown RBP10.09□□□□□ -0.79
CLIP1-209ENST00000537178 ZNF791Q3KP31 576 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-209ENST00000537178 KCTD20Q7Z5Y7 419 aa10.09□□□□□ -0.79
CLIP1-209ENST00000537178 PLXDC1Q8IUK5 500 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms