RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 ZNF764Q96H86 408 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 TMEM41AQ96HV5 264 aa16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 MARK4Q96L34 752 aa16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 ELAC2Q9BQ52 826 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 GLIPR2Q9H4G4 154 aa16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 FOLH1BQ9HBA9 442 aa16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SH3BP4Q9P0V3 963 aa16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 B4GALT7Q9UBV7 327 aa16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 LRBAP50851 2863 aa16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 CREBBPQ92793 2442 aa16.33■□□□□ 0.21
TNFRSF1A-209ENST00000536717 DOCK7Q96N67 2140 aa16.33■□□□□ 0.21
TNFRSF1A-209ENST00000536717 C19orf84I3L1E1 186 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ERN1O75460 977 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 MC3RP41968 323 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 MASP1P48740 699 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 CLNS1AP54105 237 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 C21orf58P58505 322 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 IRX1P78414 480 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 PDCD4Q53EL6 469 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 METTL21CQ5VZV1 264 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 RTL6Q6ICC9 239 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 TMEM211Q6ICI0 200 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 SPATA21Q7Z572 469 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 PACS2Q86VP3 889 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 KRTCAP2Q8N6L1 136 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 NEIL3Q8TAT5 605 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 TMBIM1Q969X1 311 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 MARVELD3Q96A59 401 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 AMDHD1Q96NU7 426 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 GNRHR2Q96P88 292 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 EXO5Q9H790 373 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 CHST11Q9NPF2 352 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ATAD3AQ9NVI7 634 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ACAD8Q9UKU7 415 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 FAM215AQ9Y5M1 114 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 CSMD1Q96PZ7 3565 aa16.33■□□□□ 0.2
TNFRSF1A-209ENST00000536717 A0A087WV62 115 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 FIGNL2A6NMB9 653 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 TSPAN2O60636 221 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 TBX19O60806 448 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 NCF2P19878 526 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ACVR2AP27037 513 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 NTSP30990 170 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 NME5P56597 212 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 NUP107P57740 925 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 PSG6Q00889 435 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 PDE7AQ13946 482 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 CPTPQ5TA50 214 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ZNF585AQ6P3V2 769 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 TMEM107Q6UX40 140 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 RIMKLAQ8IXN7 391 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 MIER2Q8N344 545 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 C10orf82Q8WW14 230 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 SLC35A4Q96G79 324 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ZBTB18Q99592 522 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 METTL7AQ9H8H3 244 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 GALNT9Q9HCQ5 603 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 SDR39U1Q9NRG7 319 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 TAS2R9Q9NYW1 312 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 COQ3Q9NZJ6 369 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ATP6V1HQ9UI12 483 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 C15orf41Q9Y2V0 281 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 FBN2P35556 2912 aa16.32■□□□□ 0.2
TNFRSF1A-209ENST00000536717 OR6C70A6NIJ9 312 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 UPK1AO00322 258 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 PLOD2O00469 737 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 GNB5O14775 395 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ANKRD28O15084 1053 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 SHOX2O60902 331 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ICOSLGO75144 302 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 SLITRK5O94991 958 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 PSMG1O95456 288 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 HPNP05981 417 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 PRF1P14222 555 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 TRPC1P48995 793 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 UFM1P61960 85 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 PMPCAQ10713 525 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ZNF385BQ569K4 471 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 WLSQ5T9L3 541 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 TIGD3Q6B0B8 471 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ANKRD26P1Q6NSI1 321 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 SLC30A6Q6NXT4 461 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 NATD1Q8N6N6 113 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 OR7A2PQ8NGA2 310 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 OR4N2Q8NGD1 307 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 RND1Q92730 232 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 OSBPL11Q9BXB4 747 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ZIM2Q9NZV7 527 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 C19orf53Q9UNZ5 99 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 RNF6Q9Y252 685 aa16.31■□□□□ 0.2
TNFRSF1A-209ENST00000536717 SNPHO15079 494 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 PDPK1O15530 556 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 SNX3O60493 162 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 WDR1O75083 606 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 REM1O75628 298 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 SLC22A3O75751 556 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 TRAPPC6AO75865 159 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ELAVL4P26378 380 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 PTPN6P29350 595 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 CDK9P50750 372 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms