RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 NOXRED1Q6NXP6 359 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 ZNF730Q6ZMV8 503 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 TMPRSS11BQ86T26 416 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 PAQR7Q86WK9 346 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 L3MBTL4Q8NA19 623 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 TM9SF4Q92544 642 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 AHCYL2Q96HN2 611 aaKnown RBP13.15□□□□□ -0.3
LIG1-203ENST00000536218 NRTNQ99748 197 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 KCNH6Q9H252 994 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 COA4Q9NYJ1 87 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 SH3BP4Q9P0V3 963 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 TCF20Q9UGU0 1960 aaKnown RBP13.15□□□□□ -0.3
LIG1-203ENST00000536218 SLC5A10A0PJK1 596 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 SLC16A5O15375 505 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 SULT1B1O43704 296 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 SH3BP5O60239 455 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 GBAP04062 536 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 FABP1P07148 127 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 IMPA1P29218 277 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 BMP8BP34820 402 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 CASP9P55211 416 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 CLDN8P56748 225 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 BTG1P62324 171 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 NTRK2Q16620 822 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 GAB4Q2WGN9 574 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 BMP8AQ7Z5Y6 402 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 ZFP41Q8N8Y5 198 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 KCT2Q8NC54 265 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 MAL2Q969L2 176 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 INTS12Q96CB8 462 aaKnown RBP13.15□□□□□ -0.3
LIG1-203ENST00000536218 MND1Q9BWT6 205 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 SAP130Q9H0E3 1048 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 SERHLQ9NQF3 203 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 CNOT2Q9NZN8 540 aaKnown RBP13.15□□□□□ -0.3
LIG1-203ENST00000536218 SLC27A6Q9Y2P4 619 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 SNX11Q9Y5W9 270 aa13.15□□□□□ -0.3
LIG1-203ENST00000536218 EDDM13A0A1B0GTR0 161 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 MAGEB17A8MXT2 336 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 POP7O75817 140 aaKnown RBP13.14□□□□□ -0.31
LIG1-203ENST00000536218 SOD1P00441 154 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 HLA-DQB1P01920 261 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 ZNF806P0C7X5 589 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 HK1P19367 917 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 RPS25P62851 125 aaKnown RBP13.14□□□□□ -0.31
LIG1-203ENST00000536218 ADAM15Q13444 863 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 ELAVL3Q14576 367 aaKnown RBP13.14□□□□□ -0.31
LIG1-203ENST00000536218 TEAD4Q15561 434 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 SWI5Q1ZZU3 235 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 PLA2G15Q8NCC3 412 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 NARS2Q96I59 477 aaKnown RBP13.14□□□□□ -0.31
LIG1-203ENST00000536218 PANX1Q96RD7 426 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 METTL17Q9H7H0 456 aaPredicted RBP13.14□□□□□ -0.31
LIG1-203ENST00000536218 NKIRAS2Q9NYR9 191 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 PLAGL1Q9UM63 463 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 YBX2Q9Y2T7 364 aaKnown RBP13.14□□□□□ -0.31
LIG1-203ENST00000536218 EYSQ5T1H1 3165 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 SAP18O00422 153 aaKnown RBP13.14□□□□□ -0.31
LIG1-203ENST00000536218 ATG12O94817 140 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 SIX6O95475 246 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 LGI1O95970 557 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 NUDT7P0C024 238 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 AMD1P17707 334 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 SLC6A1P30531 599 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 SRP9P49458 86 aaKnown RBP13.14□□□□□ -0.31
LIG1-203ENST00000536218 MPEG1Q2M385 716 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 ATAT1Q5SQI0 421 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 MAMSTRQ6ZN01 415 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 CBLL1Q75N03 491 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 KLK6Q92876 244 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 LRRC46Q96FV0 321 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 CMTM7Q96FZ5 175 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 C12orf66Q96MD2 445 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 IL17FQ96PD4 163 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 NLNQ9BYT8 704 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 VPS29Q9UBQ0 182 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 PCOLCE2Q9UKZ9 415 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 PCYT1BQ9Y5K3 369 aaPredicted RBP13.14□□□□□ -0.31
LIG1-203ENST00000536218 NUMA1Q14980 2115 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 PCDH8O95206 1070 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 KCNK5O95279 499 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 ETHE1O95571 254 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 ALDOBP05062 364 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 ANXA8P13928 327 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 RAB3BP20337 219 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 EVX1P49640 407 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 ACSM2AQ08AH3 577 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 SHHQ15465 462 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 ACSM2BQ68CK6 577 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 RGS7BPQ6MZT1 257 aaPredicted RBP13.14□□□□□ -0.31
LIG1-203ENST00000536218 ANGPTL8Q6UXH0 198 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 CDH26Q8IXH8 852 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 POP5Q969H6 163 aaKnown RBP13.14□□□□□ -0.31
LIG1-203ENST00000536218 NEIL2Q969S2 332 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 CHFRQ96EP1 664 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 ELMOD3Q96FG2 381 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 C7orf34Q96L11 122 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 DDOQ99489 341 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 FAM83CQ9BQN1 747 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 EXTL2Q9UBQ6 330 aa13.14□□□□□ -0.31
LIG1-203ENST00000536218 ZNF106Q9H2Y7 1883 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms