RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 LEF1Q9UJU2 399 aaPredicted RBP12.05□□□□□ -0.48
TMEM258-202ENST00000535042 ARL2BPQ9Y2Y0 163 aa12.05□□□□□ -0.48
TMEM258-202ENST00000535042 KLF13Q9Y2Y9 288 aaPredicted RBP12.05□□□□□ -0.48
TMEM258-202ENST00000535042 CNTRLQ7Z7A1 2325 aa12.05□□□□□ -0.48
TMEM258-202ENST00000535042 PRAMEF27A3QJZ7 478 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 EIF4E1BA6NMX2 242 aaKnown RBP12.04□□□□□ -0.48
TMEM258-202ENST00000535042 TTLL8A6PVC2 850 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 ADAM10O14672 748 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 TP53I11O14683 189 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 ANGPT2O15123 496 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 SLC22A2O15244 555 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 WISP2O76076 250 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 KCNH1O95259 989 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 RASAL1O95294 804 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 P04436 131 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 KRT16P08779 473 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 IL12BP29460 328 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 KRT20P35900 424 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 CASP3P42574 277 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 MEOX1P50221 254 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 PSPHP78330 225 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 POU6F2P78424 691 aaPredicted RBP12.04□□□□□ -0.48
TMEM258-202ENST00000535042 INPP5JQ15735 1006 aaPredicted RBP12.04□□□□□ -0.48
TMEM258-202ENST00000535042 RNFT1Q5M7Z0 435 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 ANGPTL8Q6UXH0 198 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 DPP10Q8N608 796 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 POU5F2Q8N7G0 328 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 OR2M7Q8NG81 312 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 GRHL3Q8TE85 626 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 RNF138Q8WVD3 245 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 SECISBP2Q96T21 854 aaKnown RBP12.04□□□□□ -0.48
TMEM258-202ENST00000535042 MRGBPQ9NV56 204 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 CNIH4Q9P003 139 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 HRH3Q9Y5N1 445 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 CHD6Q8TD26 2715 aa12.04□□□□□ -0.48
TMEM258-202ENST00000535042 NUP214P35658 2090 aaPredicted RBP12.04□□□□□ -0.48
TMEM258-202ENST00000535042 ANKRD33BA6NCL7 494 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 C2orf72A6NCS6 295 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 C17orf51A8MQB3 221 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 KLRC4-KLRK1H3BQV0 150 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 CLIC1O00299 241 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 HMGN4O00479 90 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 ICOSLGO75144 302 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 KRT75O95678 551 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 RFC3P40938 356 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 KHKP50053 298 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 FUT5Q11128 374 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 FOXO1Q12778 655 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 EFR3AQ14156 821 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.03□□□□□ -0.487e-6■■■■□ 20.8
TMEM258-202ENST00000535042 DCST2Q5T1A1 773 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.03□□□□□ -0.48
TMEM258-202ENST00000535042 HEPHL1Q6MZM0 1159 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 C10orf111Q8N326 155 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 ZFP62Q8NB50 900 aaPredicted RBP12.03□□□□□ -0.48
TMEM258-202ENST00000535042 CHDHQ8NE62 594 aaPredicted RBP12.03□□□□□ -0.48
TMEM258-202ENST00000535042 OR52N2Q8NGI0 321 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 OR4C3Q8NH37 302 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 XAGE5Q8WWM1 108 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 FRMD6Q96NE9 622 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 SDF2Q99470 211 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 FAM173AQ9BQD7 235 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 ANGPTL4Q9BY76 406 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 RTN4RQ9BZR6 473 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 TRIM8Q9BZR9 551 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 IKZF5Q9H5V7 419 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 IL1RL2Q9HB29 575 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 ASF1BQ9NVP2 202 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 TUBA8Q9NY65 449 aaPredicted RBP12.03□□□□□ -0.48
TMEM258-202ENST00000535042 MRTO4Q9UKD2 239 aaKnown RBP12.03□□□□□ -0.48
TMEM258-202ENST00000535042 FAM208BQ5VWN6 2430 aa12.03□□□□□ -0.48
TMEM258-202ENST00000535042 NPIPA5A0A0B4J1W7 369 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 PRAMEF25A6NGN4 478 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 LRRC3CA6NJW4 275 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 DUXAA6NLW8 204 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 NPIPA7E9PJI5 369 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 ASNA1O43681 348 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 FADS1O60427 444 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 FCMRO60667 390 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 TRIM3O75382 744 aaPredicted RBP12.02□□□□□ -0.49
TMEM258-202ENST00000535042 UTS2O95399 124 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 ZIC2O95409 532 aaPredicted RBP12.02□□□□□ -0.49
TMEM258-202ENST00000535042 NUDT7P0C024 238 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 NPIPA8P0DM63 369 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 COX4I1P13073 169 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 ETFAP13804 333 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 MST1P26927 711 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 GAS1P54826 345 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 NFYCQ13952 458 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 CYLC2Q14093 348 aaPredicted RBP12.02□□□□□ -0.49
TMEM258-202ENST00000535042 MAPRE2Q15555 327 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 MAPK11Q15759 364 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 INAQ16352 499 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 GRAMD1BQ3KR37 738 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 ARHGAP11BQ3KRB8 267 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 RUNDC3AQ59EK9 446 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 FNDC7Q5VTL7 733 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 ZNF324BQ6AW86 544 aaPredicted RBP12.02□□□□□ -0.49
TMEM258-202ENST00000535042 REP15Q6BDI9 236 aa12.02□□□□□ -0.49
TMEM258-202ENST00000535042 TMEM81Q6P7N7 255 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms