RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 C10orf82Q8WW14 230 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 AURKBQ96GD4 344 aaPredicted RBP12.84□□□□□ -0.35
VPS11-205ENST00000534551 ZNF597Q96LX8 424 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 GPR137Q96N19 417 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 PANX1Q96RD7 426 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 OSBPL11Q9BXB4 747 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 ACTRT3Q9BYD9 372 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 ZNF703Q9H7S9 590 aaPredicted RBP12.84□□□□□ -0.35
VPS11-205ENST00000534551 GIN1Q9NXP7 522 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 KLRF1Q9NZS2 232 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 BTNL2Q9UIR0 455 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 HELZ2Q9BYK8 2649 aaKnown RBP12.83□□□□□ -0.36
VPS11-205ENST00000534551 ANKUB1A6NFN9 424 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 CCDC154A6NI56 674 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 TP53I11O14683 189 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 CDC40O60508 579 aaKnown RBP eCLIP12.83□□□□□ -0.36
VPS11-205ENST00000534551 KCNK2O95069 426 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 CBX6O95503 412 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 IL33O95760 270 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 CRYABP02511 175 aaKnown RBP12.83□□□□□ -0.36
VPS11-205ENST00000534551 EVI2BP34910 448 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 MAN2A2P49641 1150 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 PPIAP62937 165 aaKnown RBP12.83□□□□□ -0.36
VPS11-205ENST00000534551 FUT5Q11128 374 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 STX5Q13190 355 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 UBAP2LQ14157 1087 aaKnown RBP12.83□□□□□ -0.36
VPS11-205ENST00000534551 GRAMD1BQ3KR37 738 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 CMPK2Q5EBM0 449 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 COX20Q5RI15 118 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 SAXO2Q658L1 398 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 ANGPTL8Q6UXH0 198 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 C6orf120Q7Z4R8 191 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 FGD2Q7Z6J4 655 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 ATCAYQ86WG3 371 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 ST6GALNAC3Q8NDV1 305 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 STON2Q8WXE9 905 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 RAB8BQ92930 207 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 NTNG2Q96CW9 530 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 SPDL1Q96EA4 605 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 FAM107BQ9H098 131 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 DEFB127Q9H1M4 99 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 OR51I1Q9H343 314 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 CNIH4Q9P003 139 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 TNFRSF10DQ9UBN6 386 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 VPS4AQ9UN37 437 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 PCDHGB4Q9UN71 923 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 FAF1Q9UNN5 650 aaPredicted RBP12.83□□□□□ -0.36
VPS11-205ENST00000534551 KIAA1549Q9HCM3 1950 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 HEATR5AQ86XA9 2040 aa12.83□□□□□ -0.36
VPS11-205ENST00000534551 CENPVL1A0A0U1RR11 272 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 RFXANKO14593 260 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 TRIM3O75382 744 aaPredicted RBP12.82□□□□□ -0.36
VPS11-205ENST00000534551 PDE9AO76083 593 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 UTS2O95399 124 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 ZIC2O95409 532 aaPredicted RBP12.82□□□□□ -0.36
VPS11-205ENST00000534551 IL6P05231 212 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 EDN3P14138 238 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 NAGAP17050 411 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 MATN1P21941 496 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 UQCRC2P22695 453 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 TCEA1P23193 301 aaKnown RBP12.82□□□□□ -0.36
VPS11-205ENST00000534551 PTPN6P29350 595 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 LSP1P33241 339 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 CHI3L1P36222 383 aaPredicted RBP12.82□□□□□ -0.36
VPS11-205ENST00000534551 MASP1P48740 699 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 ATP4BP51164 291 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 ARFIP2P53365 341 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 GAS1P54826 345 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 GNGT1P63211 74 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 POU6F2P78424 691 aaPredicted RBP12.82□□□□□ -0.36
VPS11-205ENST00000534551 DECR1Q16698 335 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 EIF2S3LQ2VIR3 472 aaKnown RBP12.82□□□□□ -0.36
VPS11-205ENST00000534551 VPS26BQ4G0F5 336 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 CYP27C1Q4G0S4 372 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 PAGE3Q5JUK9 113 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 C6orf10Q5SRN2 563 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 OR5M10Q6IEU7 315 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 GFRALQ6UXV0 394 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 APOOLQ6UXV4 268 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 ZNF621Q6ZSS3 439 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 NUP54Q7Z3B4 507 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 HMGN2P46Q86SG4 172 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 LSRQ86X29 649 aaPredicted RBP12.82□□□□□ -0.36
VPS11-205ENST00000534551 RNF130Q86XS8 419 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 CHERPQ8IWX8 916 aaKnown RBP12.82□□□□□ -0.36
VPS11-205ENST00000534551 GATSQ8NAP1 163 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 POGLUT1Q8NBL1 392 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 GALNT11Q8NCW6 608 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 DNAJB8Q8NHS0 232 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 GOT1L1Q8NHS2 421 aaPredicted RBP12.82□□□□□ -0.36
VPS11-205ENST00000534551 RNF138Q8WVD3 245 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 MOAP1Q96BY2 351 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 STACQ99469 402 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 SIKE1Q9BRV8 207 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 ANGPTL4Q9BY76 406 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 SLC6A15Q9H2J7 730 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 PIGUQ9H490 435 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 IL1RL2Q9HB29 575 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 SLC52A3Q9NQ40 469 aa12.82□□□□□ -0.36
VPS11-205ENST00000534551 SEC14L3Q9UDX4 400 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms