RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 WDR91A4D1P6 747 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 GMFGO60234 142 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 PEX11AO75192 247 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 SLITRK5O94991 958 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 ACTL6AO96019 429 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 IGFBP2P18065 325 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 DPP4P27487 766 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 EVI2BP34910 448 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 DGKQP52824 942 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 MANFP55145 182 aaKnown RBP9.49□□□□□ -0.89
CAPN1-225ENST00000533704 DLX5P56178 289 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 PSPHP78330 225 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 GAB1Q13480 694 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 KRT71Q3SY84 523 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 ZNF385BQ569K4 471 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 NHSL2Q5HYW2 709 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 ENPP6Q6UWR7 440 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 PLXDC2Q6UX71 529 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 OR2L13Q8N349 312 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 ACBD4Q8NC06 268 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 RELL2Q8NC24 303 aaPredicted RBP9.49□□□□□ -0.89
CAPN1-225ENST00000533704 PPP1R14CQ8TAE6 165 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 GPR151Q8TDV0 419 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 CAVIN3Q969G5 261 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 NTNG2Q96CW9 530 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 DTNBP1Q96EV8 351 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 RMND5BQ96G75 393 aaPredicted RBP9.49□□□□□ -0.89
CAPN1-225ENST00000533704 TREX2Q9BQ50 279 aaPredicted RBP9.49□□□□□ -0.89
CAPN1-225ENST00000533704 C1orf50Q9BV19 199 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 CENPHQ9H3R5 247 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 DSN1Q9H410 356 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 C3orf14Q9HBI5 128 aa9.49□□□□□ -0.89
CAPN1-225ENST00000533704 MRTO4Q9UKD2 239 aaKnown RBP9.49□□□□□ -0.89
CAPN1-225ENST00000533704 F8P00451 2351 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 EEF1E1-BLOC1S5C9J1V9 151 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 NPIPB8E9PQR5 432 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 PLOD2O00469 737 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 LSM1O15116 133 aaKnown RBP9.48□□□□□ -0.89
CAPN1-225ENST00000533704 EEF1E1O43324 174 aaKnown RBP9.48□□□□□ -0.89
CAPN1-225ENST00000533704 ZWINTO95229 277 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 PRPS2P11908 318 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 BCKDHAP12694 445 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 HK1P19367 917 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 SRD5A2P31213 254 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 CEACAM8P31997 349 aaPredicted RBP9.48□□□□□ -0.89
CAPN1-225ENST00000533704 TIMP3P35625 211 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 HPCAL1P37235 193 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 ASMTP46597 345 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 CLK3P49761 638 aaKnown RBP9.48□□□□□ -0.89
CAPN1-225ENST00000533704 ASCL1P50553 236 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 ZNF136P52737 540 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 PSMD4P55036 377 aaKnown RBP9.48□□□□□ -0.89
CAPN1-225ENST00000533704 CYP27C1Q4G0S4 372 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 CES4AQ5XG92 561 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 NSUN5P2Q63ZY6 315 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 WDR93Q6P2C0 686 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 AAGABQ6PD74 315 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 ARSKQ6UWY0 536 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 GALNT10Q86SR1 603 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 CDH24Q86UP0 819 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 EXOC3L1Q86VI1 746 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 NUDCD3Q8IVD9 361 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 ZZZ3Q8IYH5 903 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 UBQLNLQ8IYU4 475 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 C9orf106Q8NAJ2 232 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 NUP43Q8NFH3 380 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 PIK3R3Q92569 461 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 SLC9A6Q92581 669 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 JADE3Q92613 823 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 ZBED6CLQ96FA7 236 aaPredicted RBP9.48□□□□□ -0.89
CAPN1-225ENST00000533704 LRRC46Q96FV0 321 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 OTUB1Q96FW1 271 aaPredicted RBP9.48□□□□□ -0.89
CAPN1-225ENST00000533704 CHMP6Q96FZ7 201 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 FCRL1Q96LA6 429 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 PPP3R2Q96LZ3 170 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 TUBA1CQ9BQE3 449 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 YIPF4Q9BSR8 244 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 PARD6BQ9BYG5 372 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 SDHAF3Q9NRP4 125 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 MED11Q9P086 117 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 KCNN3Q9UGI6 736 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 TMED5Q9Y3A6 229 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 ADGRG4Q8IZF6 3080 aa9.48□□□□□ -0.89
CAPN1-225ENST00000533704 ABCA4P78363 2273 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 CD8B2A6NJW9 211 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 CLCA1A8K7I4 914 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 TMEM114B3SHH9 223 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 RGS16O15492 202 aaPredicted RBP9.47□□□□□ -0.89
CAPN1-225ENST00000533704 CTIFO43310 598 aaKnown RBP9.47□□□□□ -0.89
CAPN1-225ENST00000533704 LYPLA1O75608 230 aaPredicted RBP9.47□□□□□ -0.89
CAPN1-225ENST00000533704 KCNH1O95259 989 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 UTS2O95399 124 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 PSMG1O95456 288 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 HSPA4LO95757 839 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 IL33O95760 270 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 BPGMP07738 259 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 FGF4P08620 206 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 TMIGD3P0DMS9 266 aaPredicted RBP9.47□□□□□ -0.89
CAPN1-225ENST00000533704 CAPN3P20807 821 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 MAPK1P28482 360 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms