RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 EPHA6Q9UF33 1036 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 TNRC6CQ9HCJ0 1690 aaKnown RBP16.57■□□□□ 0.24
PHRF1-205ENST00000533464 C13orf42A0A1B0GVH6 325 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 NDUFB2O95178 105 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 IFNA21P01568 189 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 CLUP10909 449 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 SERTAD2Q14140 314 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 FRMPD2BQ6IN97 320 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 ANKRD13BQ86YJ7 626 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 PLCZ1Q86YW0 608 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 OR5K2Q8NHB8 316 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 CDS1Q92903 461 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 HOXD1Q9GZZ0 328 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 ACOT13Q9NPJ3 140 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 NPIPA2E9PIF3 369 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 NPIPA3F8WFD2 350 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 L7N2F9 121 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 PRKYO43930 277 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 OPRL1P41146 370 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 ARPC4P59998 168 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 TRA2BP62995 288 aaKnown RBP16.56■□□□□ 0.24
PHRF1-205ENST00000533464 E2F1Q01094 437 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 TANGO2Q6ICL3 276 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 ZNF619Q8N2I2 560 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 SPERTQ8NA61 448 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 FKBP10Q96AY3 582 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 MAELQ96JY0 434 aaKnown RBP16.56■□□□□ 0.24
PHRF1-205ENST00000533464 BCL7BQ9BQE9 202 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 ATXN7L1Q9ULK2 861 aaPredicted RBP16.56■□□□□ 0.24
PHRF1-205ENST00000533464 CA5BQ9Y2D0 317 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.56■□□□□ 0.24
PHRF1-205ENST00000533464 FOXE1O00358 373 aaPredicted RBP16.56■□□□□ 0.24
PHRF1-205ENST00000533464 MMP2P08253 660 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 FAM69BQ5VUD6 431 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 HORMAD2Q8N7B1 307 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 L3MBTL4Q8NA19 623 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 ZNF740Q8NDX6 193 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 TMEM239Q8WW34 195 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 TANKQ92844 425 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 USP36Q9P275 1121 aaKnown RBP16.56■□□□□ 0.24
PHRF1-205ENST00000533464 KIR2DS5A0A0G2JLQ3 304 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 A0A0G2JNG1 304 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 VSTM2BA6NLU5 285 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 KIR2DS3K7RE56 304 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 ALPLP05186 524 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 CRHBPP24387 322 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 KIR2DS5Q14953 304 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 SLCO4C1Q6ZQN7 724 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 OR2L8Q8NGY9 312 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 THAP6Q8TBB0 222 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 CASTOR1Q8WTX7 329 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 RLN3Q8WXF3 142 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 HHIPL1Q96JK4 782 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 PRRC1Q96M27 445 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 GPR78Q96P69 363 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 NAALAD2Q9Y3Q0 740 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 TOGARAM1Q9Y4F4 1720 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 MRPS14O60783 128 aaKnown RBP16.56■□□□□ 0.24
PHRF1-205ENST00000533464 DPP6P42658 865 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 EIF5AP63241 154 aaKnown RBP16.56■□□□□ 0.24
PHRF1-205ENST00000533464 EMX1Q04741 257 aaPredicted RBP16.56■□□□□ 0.24
PHRF1-205ENST00000533464 MAMDC2Q7Z304 686 aaPredicted RBP16.56■□□□□ 0.24
PHRF1-205ENST00000533464 TRIM46Q7Z4K8 759 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 OR8J2Q8NGG1 315 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 UBTD2Q8WUN7 234 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 AP1M2Q9Y6Q5 423 aa16.56■□□□□ 0.24
PHRF1-205ENST00000533464 C21orf33P30042 268 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-205ENST00000533464 NR0B1P51843 470 aaKnown RBP16.55■□□□□ 0.24
PHRF1-205ENST00000533464 SNTB2Q13425 540 aaKnown RBP16.55■□□□□ 0.24
PHRF1-205ENST00000533464 THOC7Q6I9Y2 204 aaKnown RBP16.55■□□□□ 0.24
PHRF1-205ENST00000533464 PIAS4Q8N2W9 510 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-205ENST00000533464 ZBTB8BQ8NAP8 495 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-205ENST00000533464 OR4C15Q8NGM1 316 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 UHRF1Q96T88 793 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-205ENST00000533464 ATG5Q9H1Y0 275 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 FTSJ1Q9UET6 329 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 ENPP5Q9UJA9 477 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 KLHL21Q9UJP4 597 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 SLC9B1P1A6NJY1 282 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 DISC1C4P0D8 188 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 ZNF701M0R085 212 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-205ENST00000533464 GTF2F2P13984 249 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 MMP12P39900 470 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 SOX3P41225 446 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 DEFB133Q30KQ1 61 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 LILRA3Q8N6C8 439 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-205ENST00000533464 OR6C4Q8NGE1 309 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 LRRC20Q8TCA0 184 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 CPNE2Q96FN4 548 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-205ENST00000533464 HHIPQ96QV1 700 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 OR51E2Q9H255 320 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 TP63Q9H3D4 680 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-205ENST00000533464 CPNE7Q9UBL6 633 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 CD207Q9UJ71 328 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 TEX13DA0A0J9YY54 714 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-205ENST00000533464 A0A1W2PQL4 384 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-205ENST00000533464 TEX46H3BTG2 121 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 ACOT8O14734 319 aa16.55■□□□□ 0.24
PHRF1-205ENST00000533464 FARS2O95363 451 aaKnown RBP16.55■□□□□ 0.24
PHRF1-205ENST00000533464 IL33O95760 270 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms