RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 MS4A4EQ96PG1 132 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 SERINC2Q96SA4 455 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 FBRSQ9HAH7 460 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 EVA1BQ9NVM1 165 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 IL20RAQ9UHF4 553 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 ZNF229Q9UJW7 825 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 PCDHGB6Q9Y5F9 930 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 CEP290O15078 2479 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 DUXAA6NLW8 204 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 PLD2O14939 933 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 PIP5K1CO60331 668 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 UBXN7O94888 489 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 CH25HO95992 272 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 HNRNPA2B1P22626 353 aaKnown RBP14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 ETV6P41212 452 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 TPMTP51580 245 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 RGS8P57771 180 aaPredicted RBP14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 SRP54P61011 504 aaKnown RBP14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 HTR4Q13639 388 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 SLC30A6Q6NXT4 461 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 RASSF6Q6ZTQ3 369 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 GDF7Q7Z4P5 450 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 TMEM52Q8NDY8 209 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 OR4Q3Q8NH05 313 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 TMEM203Q969S6 136 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 MCHR1Q99705 422 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 ACTR10Q9NZ32 417 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 SEC14L4Q9UDX3 406 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 STUB1Q9UNE7 303 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 ZNF443Q9Y2A4 671 aaPredicted RBP14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 PNMA8CA0A1B0GUJ8 204 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 HYKKA2RU49 373 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 PRODHO43272 600 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 LDB3O75112 727 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 MED26O95402 600 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 ACP2P11117 423 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 GNSP15586 552 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 SPNP16150 400 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 ALOX12P18054 663 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 GPR4P46093 362 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 ZNF836Q6ZNA1 936 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 USP53Q70EK8 1073 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 NRMQ8IXM6 262 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 ANKK1Q8NFD2 765 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 FAM3CQ92520 227 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 RNFT2Q96EX2 444 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 MTHFD2LQ9H903 347 aaPredicted RBP14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 SNTG1Q9NSN8 517 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 SACM1LQ9NTJ5 587 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 MRPS18AQ9NVS2 196 aaKnown RBP14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 YARS2Q9Y2Z4 477 aaKnown RBP14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 WDR45Q9Y484 360 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 SLC22A7Q9Y694 548 aa14.32□□□□□ -0.12
CACNA1E-208ENST00000533229 TICRRQ7Z2Z1 1910 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 A0A075B6Q4 140 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 ZNF670-ZNF695F2Z2N8 137 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 KLF4O43474 513 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 KCNK2O95069 426 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 EIF2S1P05198 315 aaKnown RBP14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 CPMP14384 443 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 TNFSF8P32971 234 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 CD79BP40259 229 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 EIF2B2P49770 351 aaKnown RBP14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 RNF144AP50876 292 aaPredicted RBP14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 CDC20Q12834 499 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 C1DQ13901 141 aaKnown RBP14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 MAPK14Q16539 360 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 ARHGAP11BQ3KRB8 267 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 SLC36A4Q6YBV0 504 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 GDPGP1Q6ZNW5 385 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 PLEKHM3Q6ZWE6 761 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 RRM2BQ7LG56 351 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 TRIM69Q86WT6 500 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 OR5T3Q8NGG3 340 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 ACOT11Q8WXI4 607 aaPredicted RBP14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 GATAD2BQ8WXI9 593 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 SLC41A3Q96GZ6 507 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 SDF2Q99470 211 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 TCEAL2Q9H3H9 227 aaPredicted RBP14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 TPK1Q9H3S4 243 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 RERGLQ9H628 205 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 SP140LQ9H930 580 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 FBXO34Q9NWN3 711 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 ERVK13-1Q9NX77 482 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 KLHL28Q9NXS3 571 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 PHF11Q9UIL8 331 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 PIAS3Q9Y6X2 628 aa14.31□□□□□ -0.12
CACNA1E-208ENST00000533229 H0YGG7 62 aa14.3□□□□□ -0.12
CACNA1E-208ENST00000533229 CDC42EP2O14613 210 aa14.3□□□□□ -0.12
CACNA1E-208ENST00000533229 AP3D1O14617 1153 aa14.3□□□□□ -0.12
CACNA1E-208ENST00000533229 B3GALT2O43825 422 aa14.3□□□□□ -0.12
CACNA1E-208ENST00000533229 IFNGR2P38484 337 aa14.3□□□□□ -0.12
CACNA1E-208ENST00000533229 MTNR1AP48039 350 aa14.3□□□□□ -0.12
CACNA1E-208ENST00000533229 ZNF136P52737 540 aa14.3□□□□□ -0.12
CACNA1E-208ENST00000533229 ARF3P61204 181 aaPredicted RBP14.3□□□□□ -0.12
CACNA1E-208ENST00000533229 MXD1Q05195 221 aa14.3□□□□□ -0.12
CACNA1E-208ENST00000533229 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.3□□□□□ -0.12
CACNA1E-208ENST00000533229 RAB40BQ12829 278 aa14.3□□□□□ -0.12
CACNA1E-208ENST00000533229 GPR68Q15743 365 aa14.3□□□□□ -0.12
CACNA1E-208ENST00000533229 DECR1Q16698 335 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms