RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 GRK2P25098 689 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 MSX1P28360 303 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 HPCAL1P37235 193 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 PTGDSP41222 190 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 MC3RP41968 323 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 DSCR4P56555 118 aaPredicted RBP8.75□□□□□ -1.01
CHD7-208ENST00000528280 CORO7P57737 925 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 PRR5P85299 388 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 PSG6Q00889 435 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 C17orf67Q0P5P2 114 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 ZNF155Q12901 538 aaPredicted RBP8.75□□□□□ -1.01
CHD7-208ENST00000528280 GAB1Q13480 694 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 GANABQ14697 944 aaKnown RBP8.75□□□□□ -1.01
CHD7-208ENST00000528280 LSM12Q3MHD2 195 aaKnown RBP8.75□□□□□ -1.01
CHD7-208ENST00000528280 GALNTL6Q49A17 601 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 GLYR1Q49A26 553 aaPredicted RBP8.75□□□□□ -1.01
CHD7-208ENST00000528280 WIPI1Q5MNZ9 446 aaPredicted RBP8.75□□□□□ -1.01
CHD7-208ENST00000528280 SH2D4BQ5SQS7 431 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 NSUN5P2Q63ZY6 315 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 TMEM107Q6UX40 140 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 NCCRP1Q6ZVX7 275 aaPredicted RBP8.75□□□□□ -1.01
CHD7-208ENST00000528280 CHMP1BQ7LBR1 199 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 CCDC71Q8IV32 467 aaPredicted RBP8.75□□□□□ -1.01
CHD7-208ENST00000528280 CDRT4Q8N9R6 151 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 WDSUB1Q8N9V3 476 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 SIMC1Q8NDZ2 872 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 WDYHV1Q96HA8 205 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 EGLN2Q96KS0 407 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 ZFP3Q96NJ6 502 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 LMF2Q9BU23 707 aaKnown RBP8.75□□□□□ -1.01
CHD7-208ENST00000528280 OR2B2Q9GZK3 357 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 ACBD3Q9H3P7 528 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 TUBB1Q9H4B7 451 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 TNFRSF12AQ9NP84 129 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 TAS2R10Q9NYW0 307 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 NTMQ9P121 344 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 SLC17A7Q9P2U7 560 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 Q9UFV3 132 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 KCNN3Q9UGI6 736 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.75□□□□□ -1.01
CHD7-208ENST00000528280 CAMK2AQ9UQM7 478 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 EIF3LQ9Y262 564 aaKnown RBP8.75□□□□□ -1.01
CHD7-208ENST00000528280 WIF1Q9Y5W5 379 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 ACTL7BQ9Y614 415 aa8.75□□□□□ -1.01
CHD7-208ENST00000528280 V9GYY5 206 aaPredicted RBP8.75□□□□□ -1.01
CHD7-208ENST00000528280 C2orf72A6NCS6 295 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 C19orf84I3L1E1 186 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 PIP5K1BO14986 540 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 EMC8O43402 210 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 AKAP10O43572 662 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 FADS1O60427 444 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 PEX11AO75192 247 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 ZWINTO95229 277 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 PSMG1O95456 288 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 IL18BPO95998 194 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 CHRNGP07510 517 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 SNRPB2P08579 225 aaKnown RBP8.74□□□□□ -1.01
CHD7-208ENST00000528280 BCKDHAP12694 445 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 SDC1P18827 310 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 PRPS1L1P21108 318 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 TACR1P25103 407 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 CEACAM8P31997 349 aaPredicted RBP8.74□□□□□ -1.01
CHD7-208ENST00000528280 GABRA3P34903 492 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 OPRM1P35372 400 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 FRKP42685 505 aaPredicted RBP8.74□□□□□ -1.01
CHD7-208ENST00000528280 SERPINB4P48594 390 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 PRIM2P49643 509 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 RPL38P63173 70 aaKnown RBP8.74□□□□□ -1.01
CHD7-208ENST00000528280 PDE7AQ13946 482 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 CDSNQ15517 529 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 ACSF3Q4G176 576 aaPredicted RBP8.74□□□□□ -1.01
CHD7-208ENST00000528280 EIPR1Q53HC9 387 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 CPTPQ5TA50 214 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 BHLHB9Q6PI77 547 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 YRDCQ86U90 279 aaKnown RBP8.74□□□□□ -1.01
CHD7-208ENST00000528280 IFNEQ86WN2 208 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 TRIM42Q8IWZ5 723 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 DMRTC2Q8IXT2 367 aaPredicted RBP8.74□□□□□ -1.01
CHD7-208ENST00000528280 NUP43Q8NFH3 380 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 OR4K17Q8NGC6 315 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 OR6Y1Q8NGX8 325 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 OR2T11Q8NH01 316 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 GPR151Q8TDV0 419 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 RNF138Q8WVD3 245 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 GFM2Q969S9 779 aaKnown RBP8.74□□□□□ -1.01
CHD7-208ENST00000528280 TSSK3Q96PN8 268 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 UCN2Q96RP3 112 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 TM9SF2Q99805 663 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 G6PC3Q9BUM1 346 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 UGT2B28Q9BY64 529 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 TRIM8Q9BZR9 551 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 UCK2Q9BZX2 261 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 ANKRA2Q9H9E1 313 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 MCCC2Q9HCC0 563 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 GALNT9Q9HCQ5 603 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 SERHLQ9NQF3 203 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 ZNF446Q9NWS9 450 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 FAM120CQ9NX05 1096 aaKnown RBP8.74□□□□□ -1.01
CHD7-208ENST00000528280 GIN1Q9NXP7 522 aa8.74□□□□□ -1.01
CHD7-208ENST00000528280 PPP4R1LQ9P1A2 415 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms