RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 FBRSL1Q9HCM7 1045 aaKnown RBP5.48□□□□□ -1.53
CD44-225ENST00000527326 HHATLQ9HCP6 504 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 PARD6AQ9NPB6 346 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 PRDM7Q9NQW5 492 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 PARPBPQ9NWS1 579 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 NLGN3Q9NZ94 848 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 ARHGAP28Q9P2N2 729 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 TBX20Q9UMR3 447 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 USP18Q9UMW8 372 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 SAMD4AQ9UPU9 718 aaKnown RBP5.48□□□□□ -1.53
CD44-225ENST00000527326 TNFSF13BQ9Y275 285 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 ARID2Q68CP9 1835 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 A0A1W2PN81 502 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 A0A1W2PPQ1 181 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 FAM221AA4D161 298 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 LRIT2A6NDA9 550 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 A8MT66 165 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 AGAP14A8MT82 685 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 FAM86B1E9PN63 330 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 H0YIV9 168 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 H7C4K7 107 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 RFXAPO00287 272 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 MID1O15344 667 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 SIGLEC5O15389 551 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 LRRTM2O43300 516 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 TPST2O60704 377 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 GALR3O60755 368 aaPredicted RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 RDH16O75452 317 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 GATBO75879 557 aaKnown RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 BEST1O76090 585 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 AP2A2O94973 939 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 AKR7A3O95154 331 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 SIX3O95343 332 aaPredicted RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 IL33O95760 270 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 STARD3NLO95772 234 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 GLP2RO95838 553 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 CALCAP01258 141 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 HIST1H2ABP04908 130 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 HOXB5P09067 269 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 METTL15P1P0C7V9 234 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 GKN3PP0CG01 181 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 HGFP14210 728 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 DAOP14920 347 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 CPN1P15169 458 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 ZNF44P15621 663 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 PAMP19021 973 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 POU3F2P20265 443 aaPredicted RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 HOXA5P20719 270 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 PRPS1L1P21108 318 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 TBXA2RP21731 343 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 AHCYP23526 432 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 PTPN3P26045 913 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 MIPP30301 263 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 MPIP34949 423 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 CHRNA7P36544 502 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 BDKRB1P46663 353 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 GLRBP48167 497 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 GIPRP48546 466 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 NOVP48745 357 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 STK19P49842 368 aaPredicted RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 PPT1P50897 306 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 CCR6P51684 374 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 GMFBP60983 142 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 BLOC1S1P78537 153 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 NAE1Q13564 534 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 OR8G1Q15617 311 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 TRAM1Q15629 374 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 INPP5JQ15735 1006 aaPredicted RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 ST3GAL2Q16842 350 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 ZNF630Q2M218 657 aaPredicted RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 CHRFAM7AQ494W8 412 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 TECRLQ5HYJ1 363 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 RPS26P11Q5JNZ5 115 aaPredicted RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 AFMIDQ63HM1 303 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 SLC25A24Q6NUK1 477 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 H3F3CQ6NXT2 135 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 TAPT1Q6NXT6 567 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 CDC73Q6P1J9 531 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 FAM199XQ6PEV8 388 aaPredicted RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 TMEM270Q6UE05 265 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 LCLAT1Q6UWP7 414 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 CYHR1Q6ZMK1 362 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 HIST3H2AQ7L7L0 130 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 SLC29A4Q7RTT9 530 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 SMIM15Q7Z3B0 74 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 PLEKHH3Q7Z736 793 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 IQCHQ86VS3 1027 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 LRRC28Q86X40 367 aaPredicted RBP5.47□□□□□ -1.53
CD44-225ENST00000527326 NUDT13Q86X67 352 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 FAM131BQ86XD5 332 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 VRK3Q8IV63 474 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 GID4Q8IVV7 300 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 ZBTB8OSQ8IWT0 167 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 GPR137CQ8N3F9 429 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 FAM86B1Q8N7N1 296 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 ZNF321PQ8N8H1 164 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 SYT14Q8NB59 555 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 DNAAF1Q8NEP3 725 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 TMEM185AQ8NFB2 350 aa5.47□□□□□ -1.53
CD44-225ENST00000527326 OR5T1Q8NG75 326 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms