RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 UQCRC2P22695 453 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 IL12AP29459 219 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 PTGDSP41222 190 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 MAGEA5P43359 124 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 CLK3P49761 638 aaKnown RBP11.49□□□□□ -0.57
VEGFA-225ENST00000523950 ATP4BP51164 291 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 NME5P56597 212 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 KCNK10P57789 538 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 PHC1P78364 1004 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 TXNL4AP83876 142 aaKnown RBP11.49□□□□□ -0.57
VEGFA-225ENST00000523950 SLC10A1Q14973 349 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 DUSP5Q16690 384 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.49□□□□□ -0.57
VEGFA-225ENST00000523950 C4orf17Q53FE4 359 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 TIGD3Q6B0B8 471 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 EID3Q8N140 333 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 COX18Q8N8Q8 333 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 SLC16A11Q8NCK7 471 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 OR52N2Q8NGI0 321 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 OR1J4Q8NGS1 313 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 FAM110BQ8TC76 370 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 ADAMTS15Q8TE58 950 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 JADE3Q92613 823 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 EFHD2Q96C19 240 aaPredicted RBP11.49□□□□□ -0.57
VEGFA-225ENST00000523950 OR52E6Q96RD3 313 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 EBF4Q9BQW3 602 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 G6PC3Q9BUM1 346 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 BTBD2Q9BX70 525 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 TSPAN10Q9H1Z9 355 aaPredicted RBP11.49□□□□□ -0.57
VEGFA-225ENST00000523950 SDHAF3Q9NRP4 125 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 GPATCH2Q9NW75 528 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 TRIM33Q9UPN9 1127 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 OSGIN2Q9Y236 505 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 SLC5A6Q9Y289 635 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 C15orf41Q9Y2V0 281 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 WIF1Q9Y5W5 379 aa11.49□□□□□ -0.57
VEGFA-225ENST00000523950 NUP214P35658 2090 aaPredicted RBP11.48□□□□□ -0.57
VEGFA-225ENST00000523950 SVILO95425 2214 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 A0A1B0GVC2 190 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 FAM234BA2RU67 622 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 AQP7O14520 342 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 CDC40O60508 579 aaKnown RBP eCLIP11.48□□□□□ -0.572e-13■■□□□ 11.5
VEGFA-225ENST00000523950 SLC19A2O60779 497 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 KCNK2O95069 426 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 AK1P00568 194 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 NGFRP08138 427 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 TROVE2P10155 538 aaKnown RBP eCLIP11.48□□□□□ -0.57
VEGFA-225ENST00000523950 ABOP16442 354 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 EVI2BP34910 448 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 PTGS2P35354 604 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 CA7P43166 264 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 MAGEA8P43361 318 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 PER3P56645 1201 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 POU6F2P78424 691 aaPredicted RBP11.48□□□□□ -0.57
VEGFA-225ENST00000523950 FNDC7Q5VTL7 733 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 BICRALQ6AI39 1079 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 MTFR2Q6P444 385 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 ANGPTL8Q6UXH0 198 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 TRILQ7L0X0 811 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 C6orf120Q7Z4R8 191 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 WDR53Q7Z5U6 358 aaPredicted RBP11.48□□□□□ -0.57
VEGFA-225ENST00000523950 ANKRD46Q86W74 232 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 SPPL2CQ8IUH8 684 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 MIPOL1Q8TD10 442 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 PIK3R3Q92569 461 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 RELTQ969Z4 430 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 RMND5BQ96G75 393 aaPredicted RBP11.48□□□□□ -0.57
VEGFA-225ENST00000523950 C16orf58Q96GQ5 468 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 SLC35G5Q96KT7 338 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 MARK4Q96L34 752 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 JSRP1Q96MG2 331 aaPredicted RBP11.48□□□□□ -0.57
VEGFA-225ENST00000523950 PANX1Q96RD7 426 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 UBQLN3Q9H347 655 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 RABEP2Q9H5N1 569 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 RMND5AQ9H871 391 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 MRGBPQ9NV56 204 aa11.48□□□□□ -0.57
VEGFA-225ENST00000523950 TRGV5A0A0B4J1U4 118 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 A0A1B0GTH9 108 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 GXYLT2A0PJZ3 443 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 PRRG2O14669 202 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 BCKDKO14874 412 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 FADS1O60427 444 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 CBR3O75828 277 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 CPSF4O95639 269 aaKnown RBP11.47□□□□□ -0.57
VEGFA-225ENST00000523950 HPNP05981 417 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 MATN1P21941 496 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 GDF1P27539 372 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 PTPN6P29350 595 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 MAN2A2P49641 1150 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 ANXA11P50995 505 aaKnown RBP11.47□□□□□ -0.57
VEGFA-225ENST00000523950 POLR2JP52435 117 aaKnown RBP11.47□□□□□ -0.57
VEGFA-225ENST00000523950 DGKQP52824 942 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 UBAP2LQ14157 1087 aaKnown RBP11.47□□□□□ -0.57
VEGFA-225ENST00000523950 SQLEQ14534 574 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 METTL21CQ5VZV1 264 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 SAXO2Q658L1 398 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 DESI1Q6ICB0 168 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 PLCZ1Q86YW0 608 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 CHERPQ8IWX8 916 aaKnown RBP11.47□□□□□ -0.57
VEGFA-225ENST00000523950 OR5AK3PQ8NH89 298 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms