RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 PBKQ96KB5 322 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 SERPINI1Q99574 410 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 C12orf65Q9H3J6 166 aaKnown RBP10.39□□□□□ -0.75
SDCBP-211ENST00000523441 TMEM185BQ9H7F4 350 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 IPPKQ9H8X2 491 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 BARX1Q9HBU1 254 aaPredicted RBP10.39□□□□□ -0.75
SDCBP-211ENST00000523441 FANCFQ9NPI8 374 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 PLSCR4Q9NRQ2 329 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 FBXO34Q9NWN3 711 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 NSMCE4AQ9NXX6 385 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 CPSF2Q9P2I0 782 aaKnown RBP10.39□□□□□ -0.75
SDCBP-211ENST00000523441 B3GALT5Q9Y2C3 310 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 GPR55Q9Y2T6 319 aaPredicted RBP10.39□□□□□ -0.75
SDCBP-211ENST00000523441 MRPS18CQ9Y3D5 142 aaKnown RBP10.39□□□□□ -0.75
SDCBP-211ENST00000523441 ZNF780BQ9Y6R6 833 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 MALRD1Q5VYJ5 2156 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 KCNAB3O43448 404 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 CXCL13O43927 109 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 KIAA0513O60268 411 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 LMX1BO60663 402 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 SIX3O95343 332 aaPredicted RBP10.38□□□□□ -0.75
SDCBP-211ENST00000523441 SYNGR4O95473 234 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 SSTR1P30872 391 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 EVI2BP34910 448 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 GAS1P54826 345 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 CDH11P55287 796 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 ZNF155Q12901 538 aaPredicted RBP10.38□□□□□ -0.75
SDCBP-211ENST00000523441 GTF2H2Q13888 395 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 GUSBP1Q15486 140 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 TAB1Q15750 504 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 GTF2H2CQ6P1K8 395 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 FIGNL1Q6PIW4 674 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 DNM1P46Q6ZS02 220 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 TBC1D1Q86TI0 1168 aaPredicted RBP10.38□□□□□ -0.75
SDCBP-211ENST00000523441 ISCA2Q86U28 154 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 MARCH3Q86UD3 253 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 CTAGE3PQ8IX95 158 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 CCDC116Q8IYX3 515 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 OR52B6Q8NGF0 335 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 OR9A2Q8NGT5 310 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 OR10D3Q8NH80 312 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 UHMK1Q8TAS1 419 aaKnown RBP10.38□□□□□ -0.75
SDCBP-211ENST00000523441 DUSP19Q8WTR2 217 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 ROBO4Q8WZ75 1007 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 SLC9A6Q92581 669 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 EXOSC8Q96B26 276 aaKnown RBP10.38□□□□□ -0.75
SDCBP-211ENST00000523441 SLC35A4Q96G79 324 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 GMPPAQ96IJ6 420 aaPredicted RBP10.38□□□□□ -0.75
SDCBP-211ENST00000523441 ATOH8Q96SQ7 321 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 TRAF4Q9BUZ4 470 aaPredicted RBP10.38□□□□□ -0.75
SDCBP-211ENST00000523441 CACNG6Q9BXT2 260 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 RTN4RQ9BZR6 473 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 PTGES2Q9H7Z7 377 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 CISD1Q9NZ45 108 aaKnown RBP10.38□□□□□ -0.75
SDCBP-211ENST00000523441 SENP1Q9P0U3 644 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 XPR1Q9UBH6 696 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 RNF14Q9UBS8 474 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 LPAR3Q9UBY5 353 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 ZNF639Q9UID6 485 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 SLC12A4Q9UP95 1085 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 GPR52Q9Y2T5 361 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 PCDHA9Q9Y5H5 950 aa10.38□□□□□ -0.75
SDCBP-211ENST00000523441 C1orf226A1L170 272 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 SLC35F4A4IF30 521 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 DPRXA6NFQ7 191 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 GOLGA6L6A8MZA4 724 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 H0YIV9 168 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 TNFSF11O14788 317 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 TO15178 435 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 SPRY1O43609 319 aaPredicted RBP10.37□□□□□ -0.75
SDCBP-211ENST00000523441 KERAO60938 352 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 SS18L1O75177 396 aaPredicted RBP10.37□□□□□ -0.75
SDCBP-211ENST00000523441 CD8AP01732 235 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 ATP1B1P05026 303 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 CT45A8P0DMV1 189 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 CT45A9P0DMV2 189 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 IGHV4-31P0DP07 118 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 IGFBP5P24593 272 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 IRX1P78414 480 aaPredicted RBP10.37□□□□□ -0.75
SDCBP-211ENST00000523441 MORF4L2Q15014 288 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 ERCC6LQ2NKX8 1250 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 CT45A2Q5DJT8 189 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 FREM1Q5H8C1 2179 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 MFSD12Q6NUT3 480 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 PAGE2Q7Z2X7 111 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 MILR1Q7Z6M3 343 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 GGNQ86UU5 652 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 CCDC25Q86WR0 208 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 GBP7Q8N8V2 638 aaPredicted RBP10.37□□□□□ -0.75
SDCBP-211ENST00000523441 FADS6Q8N9I5 356 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 STEAP2Q8NFT2 490 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 WDR20Q8TBZ3 569 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 UBTD2Q8WUN7 234 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 KCTD4Q8WVF5 259 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 NXNL1Q96CM4 212 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 MRRFQ96E11 262 aaKnown RBP10.37□□□□□ -0.75
SDCBP-211ENST00000523441 CNRIP1Q96F85 164 aaPredicted RBP10.37□□□□□ -0.75
SDCBP-211ENST00000523441 C1orf159Q96HA4 380 aa10.37□□□□□ -0.75
SDCBP-211ENST00000523441 ADAD1Q96M93 576 aaKnown RBP10.37□□□□□ -0.75
SDCBP-211ENST00000523441 RBBP8Q99708 897 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms