RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 TCHHL1Q5QJ38 904 aaPredicted RBP23.34■■□□□ 1.33
PVT1-219ENST00000523427 GBP7Q8N8V2 638 aaPredicted RBP23.34■■□□□ 1.33
PVT1-219ENST00000523427 OR2M3Q8NG83 312 aa23.34■■□□□ 1.33
PVT1-219ENST00000523427 ZNF675Q8TD23 568 aa23.34■■□□□ 1.33
PVT1-219ENST00000523427 TMEM171Q8WVE6 324 aa23.34■■□□□ 1.33
PVT1-219ENST00000523427 MTBPQ96DY7 904 aa23.34■■□□□ 1.33
PVT1-219ENST00000523427 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.33■■□□□ 1.33
PVT1-219ENST00000523427 OR4F21O95013 312 aa23.33■■□□□ 1.33
PVT1-219ENST00000523427 OTCP00480 354 aa23.33■■□□□ 1.33
PVT1-219ENST00000523427 EVI2BP34910 448 aa23.33■■□□□ 1.33
PVT1-219ENST00000523427 PCYT1AP49585 367 aa23.33■■□□□ 1.33
PVT1-219ENST00000523427 GUCY2DQ02846 1103 aa23.33■■□□□ 1.33
PVT1-219ENST00000523427 ZNF155Q12901 538 aaPredicted RBP23.33■■□□□ 1.33
PVT1-219ENST00000523427 SGCBQ16585 318 aa23.33■■□□□ 1.33
PVT1-219ENST00000523427 RAB17Q9H0T7 212 aa23.33■■□□□ 1.33
PVT1-219ENST00000523427 RNF122Q9H9V4 155 aa23.33■■□□□ 1.33
PVT1-219ENST00000523427 BRF2Q9HAW0 419 aa23.33■■□□□ 1.33
PVT1-219ENST00000523427 FLRT3Q9NZU0 649 aa23.33■■□□□ 1.33
PVT1-219ENST00000523427 VPS29Q9UBQ0 182 aa23.33■■□□□ 1.33
PVT1-219ENST00000523427 TMCO1Q9UM00 188 aa23.33■■□□□ 1.33
PVT1-219ENST00000523427 CLEC4AQ9UMR7 237 aa23.33■■□□□ 1.33
PVT1-219ENST00000523427 SONP18583 2426 aaKnown RBP23.32■■□□□ 1.32
PVT1-219ENST00000523427 GNG14A0A1W2PPG7 69 aa23.32■■□□□ 1.32
PVT1-219ENST00000523427 OR2M5A3KFT3 312 aa23.32■■□□□ 1.32
PVT1-219ENST00000523427 TNFRSF21O75509 655 aa23.32■■□□□ 1.32
PVT1-219ENST00000523427 PLAUP00749 431 aa23.32■■□□□ 1.32
PVT1-219ENST00000523427 CTAGE8P0CG41 777 aa23.32■■□□□ 1.32
PVT1-219ENST00000523427 CD8BP10966 210 aa23.32■■□□□ 1.32
PVT1-219ENST00000523427 CHN1P15882 459 aa23.32■■□□□ 1.32
PVT1-219ENST00000523427 RFX3P48380 749 aa23.32■■□□□ 1.32
PVT1-219ENST00000523427 TRA2BP62995 288 aaKnown RBP23.32■■□□□ 1.32
PVT1-219ENST00000523427 UBAP2Q5T6F2 1119 aaKnown RBP23.32■■□□□ 1.32
PVT1-219ENST00000523427 ALKBH2Q6NS38 261 aa23.32■■□□□ 1.32
PVT1-219ENST00000523427 CTAGE4Q8IX94 777 aa23.32■■□□□ 1.32
PVT1-219ENST00000523427 FADS6Q8N9I5 356 aa23.32■■□□□ 1.32
PVT1-219ENST00000523427 MAPK1IP1LQ8NDC0 245 aa23.32■■□□□ 1.32
PVT1-219ENST00000523427 SPATA3Q8NHX4 192 aa23.32■■□□□ 1.32
PVT1-219ENST00000523427 UHMK1Q8TAS1 419 aaKnown RBP23.32■■□□□ 1.32
PVT1-219ENST00000523427 PRRG4Q9BZD6 226 aa23.32■■□□□ 1.32
PVT1-219ENST00000523427 GIMAP4Q9NUV9 329 aa23.32■■□□□ 1.32
PVT1-219ENST00000523427 FBN1P35555 2871 aaKnown RBP23.32■■□□□ 1.32
PVT1-219ENST00000523427 THBDP07204 575 aa23.31■■□□□ 1.32
PVT1-219ENST00000523427 RPS17P08708 135 aaKnown RBP23.31■■□□□ 1.32
PVT1-219ENST00000523427 ATP5J2P56134 94 aa23.31■■□□□ 1.32
PVT1-219ENST00000523427 MRPS22P82650 360 aaKnown RBP23.31■■□□□ 1.32
PVT1-219ENST00000523427 LGSNQ5TDP6 509 aa23.31■■□□□ 1.32
PVT1-219ENST00000523427 ZNF704Q6ZNC4 412 aaPredicted RBP23.31■■□□□ 1.32
PVT1-219ENST00000523427 CDYL2Q8N8U2 506 aa23.31■■□□□ 1.32
PVT1-219ENST00000523427 OR7G2Q8NG99 324 aa23.31■■□□□ 1.32
PVT1-219ENST00000523427 STMN4Q9H169 189 aaPredicted RBP23.31■■□□□ 1.32
PVT1-219ENST00000523427 ESYT3A0FGR9 886 aa23.3■■□□□ 1.32
PVT1-219ENST00000523427 SHISA8B8ZZ34 492 aa23.3■■□□□ 1.32
PVT1-219ENST00000523427 PCDH7O60245 1069 aa23.3■■□□□ 1.32
PVT1-219ENST00000523427 AQP8O94778 261 aa23.3■■□□□ 1.32
PVT1-219ENST00000523427 RPS3AP61247 264 aaKnown RBP23.3■■□□□ 1.32
PVT1-219ENST00000523427 BEX5Q5H9J7 111 aa23.3■■□□□ 1.32
PVT1-219ENST00000523427 TEX35Q5T0J7 233 aa23.3■■□□□ 1.32
PVT1-219ENST00000523427 WFDC8Q8IUA0 241 aa23.3■■□□□ 1.32
PVT1-219ENST00000523427 ZNF483Q8TF39 744 aaPredicted RBP23.3■■□□□ 1.32
PVT1-219ENST00000523427 DUSP19Q8WTR2 217 aa23.3■■□□□ 1.32
PVT1-219ENST00000523427 RNF138Q8WVD3 245 aa23.3■■□□□ 1.32
PVT1-219ENST00000523427 RTN4RQ9BZR6 473 aa23.3■■□□□ 1.32
PVT1-219ENST00000523427 PTGES2Q9H7Z7 377 aa23.3■■□□□ 1.32
PVT1-219ENST00000523427 SDHAF3Q9NRP4 125 aa23.3■■□□□ 1.32
PVT1-219ENST00000523427 TAS2R9Q9NYW1 312 aa23.3■■□□□ 1.32
PVT1-219ENST00000523427 MCM8Q9UJA3 840 aa23.3■■□□□ 1.32
PVT1-219ENST00000523427 ZNF175Q9Y473 711 aa23.3■■□□□ 1.32
PVT1-219ENST00000523427 STAB1Q9NY15 2570 aa23.3■■□□□ 1.32
PVT1-219ENST00000523427 MANBAO00462 879 aa23.29■■□□□ 1.32
PVT1-219ENST00000523427 KLF4O43474 513 aa23.29■■□□□ 1.32
PVT1-219ENST00000523427 FGFBP1Q14512 234 aa23.29■■□□□ 1.32
PVT1-219ENST00000523427 FAM214BQ7L5A3 538 aa23.29■■□□□ 1.32
PVT1-219ENST00000523427 MARCH3Q86UD3 253 aa23.29■■□□□ 1.32
PVT1-219ENST00000523427 FAM9CQ8IZT9 166 aa23.29■■□□□ 1.32
PVT1-219ENST00000523427 CDC26Q8NHZ8 85 aa23.29■■□□□ 1.32
PVT1-219ENST00000523427 BBS4Q96RK4 519 aa23.29■■□□□ 1.32
PVT1-219ENST00000523427 CXorf56Q9H5V9 222 aa23.29■■□□□ 1.32
PVT1-219ENST00000523427 SLC35C2Q9NQQ7 365 aa23.29■■□□□ 1.32
PVT1-219ENST00000523427 ZNF225Q9UK10 706 aa23.29■■□□□ 1.32
PVT1-219ENST00000523427 FADS1O60427 444 aa23.28■■□□□ 1.32
PVT1-219ENST00000523427 PLGP00747 810 aaPredicted RBP23.28■■□□□ 1.32
PVT1-219ENST00000523427 PHBP35232 272 aa23.28■■□□□ 1.32
PVT1-219ENST00000523427 PSG6Q00889 435 aa23.28■■□□□ 1.32
PVT1-219ENST00000523427 SLC7A5Q01650 507 aa23.28■■□□□ 1.32
PVT1-219ENST00000523427 BTKQ06187 659 aa23.28■■□□□ 1.32
PVT1-219ENST00000523427 TNK1Q13470 666 aa23.28■■□□□ 1.32
PVT1-219ENST00000523427 GFM2Q969S9 779 aaKnown RBP23.28■■□□□ 1.32
PVT1-219ENST00000523427 ERP27Q96DN0 273 aa23.28■■□□□ 1.32
PVT1-219ENST00000523427 PLPPR2Q96GM1 343 aa23.28■■□□□ 1.32
PVT1-219ENST00000523427 EBPLQ9BY08 206 aa23.28■■□□□ 1.32
PVT1-219ENST00000523427 DMGDHQ9UI17 866 aaKnown RBP23.28■■□□□ 1.32
PVT1-219ENST00000523427 CRLF1O75462 422 aa23.27■■□□□ 1.32
PVT1-219ENST00000523427 KRT6AP02538 564 aa23.27■■□□□ 1.32
PVT1-219ENST00000523427 KRT6BP04259 564 aa23.27■■□□□ 1.32
PVT1-219ENST00000523427 INHBAP08476 426 aa23.27■■□□□ 1.32
PVT1-219ENST00000523427 EIF1AXP47813 144 aaKnown RBP23.27■■□□□ 1.32
PVT1-219ENST00000523427 SLC6A8P48029 635 aa23.27■■□□□ 1.32
PVT1-219ENST00000523427 KRT6CP48668 564 aa23.27■■□□□ 1.32
PVT1-219ENST00000523427 CTBP2P56545 445 aa23.27■■□□□ 1.32
PVT1-219ENST00000523427 RAE1P78406 368 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms