RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 CHRNGP07510 517 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 GPC1P35052 558 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 LHX2P50458 406 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 TESK1Q15569 626 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 ZNHIT3Q15649 155 aaPredicted RBP18.77■□□□□ 0.6
SDCBP-209ENST00000522243 DECR1Q16698 335 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 FBXL19-AS1Q494R0 122 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 GALNTL6Q49A17 601 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 CYP27C1Q4G0S4 372 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 RFTN2Q52LD8 501 aaPredicted RBP18.77■□□□□ 0.6
SDCBP-209ENST00000522243 KANK2Q63ZY3 851 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 AAGABQ6PD74 315 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 BANPQ8N9N5 519 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 METTL2AQ96IZ6 378 aaKnown RBP18.77■□□□□ 0.6
SDCBP-209ENST00000522243 FAM111AQ96PZ2 611 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 G6PC3Q9BUM1 346 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 POLDIP3Q9BY77 421 aaKnown RBP18.77■□□□□ 0.6
SDCBP-209ENST00000522243 RTN4RQ9BZR6 473 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 Q9N2J8 555 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 EQTNQ9NQ60 294 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 MED11Q9P086 117 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 BAIAP2L1Q9UHR4 511 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 GXYLT2A0PJZ3 443 aa18.76■□□□□ 0.59
SDCBP-209ENST00000522243 NPIPB8E9PQR5 432 aa18.76■□□□□ 0.59
SDCBP-209ENST00000522243 PDPK1O15530 556 aa18.76■□□□□ 0.59
SDCBP-209ENST00000522243 FADS1O60427 444 aa18.76■□□□□ 0.59
SDCBP-209ENST00000522243 SDC1P18827 310 aa18.76■□□□□ 0.59
SDCBP-209ENST00000522243 GABRA3P34903 492 aa18.76■□□□□ 0.59
SDCBP-209ENST00000522243 OPRM1P35372 400 aa18.76■□□□□ 0.59
SDCBP-209ENST00000522243 CLDN18P56856 261 aa18.76■□□□□ 0.59
SDCBP-209ENST00000522243 VSNL1P62760 191 aa18.76■□□□□ 0.59
SDCBP-209ENST00000522243 FLYWCH1Q4VC44 716 aa18.76■□□□□ 0.59
SDCBP-209ENST00000522243 TRABD2AQ86V40 505 aa18.76■□□□□ 0.59
SDCBP-209ENST00000522243 OR2M3Q8NG83 312 aa18.76■□□□□ 0.59
SDCBP-209ENST00000522243 INTS12Q96CB8 462 aaKnown RBP18.76■□□□□ 0.59
SDCBP-209ENST00000522243 DTNBP1Q96EV8 351 aa18.76■□□□□ 0.59
SDCBP-209ENST00000522243 LMF2Q9BU23 707 aaKnown RBP18.76■□□□□ 0.59
SDCBP-209ENST00000522243 REEP4Q9H6H4 257 aa18.76■□□□□ 0.59
SDCBP-209ENST00000522243 SH3BP4Q9P0V3 963 aa18.76■□□□□ 0.59
SDCBP-209ENST00000522243 MRPS18CQ9Y3D5 142 aaKnown RBP18.76■□□□□ 0.59
SDCBP-209ENST00000522243 DNAJC15Q9Y5T4 150 aa18.76■□□□□ 0.59
SDCBP-209ENST00000522243 POLQO75417 2590 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 IL33O95760 270 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 CHEK2O96017 543 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 NEFHP12036 1026 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 ZNF708P17019 499 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 DNAJA1P31689 397 aaKnown RBP18.75■□□□□ 0.59
SDCBP-209ENST00000522243 PEX19P40855 299 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 PRKAG1P54619 331 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 DSCR4P56555 118 aaPredicted RBP18.75■□□□□ 0.59
SDCBP-209ENST00000522243 ZCCHC23Q6ZST2 131 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 SZRD1Q7Z422 152 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 MARCH3Q86UD3 253 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 DDIASQ8IXT1 998 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 GCNT2Q8N0V5 402 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 FADS6Q8N9I5 356 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 LINC01560Q8TB33 94 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 AGR3Q8TD06 166 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 PIK3R3Q92569 461 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 PPCDCQ96CD2 204 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 FCRL1Q96LA6 429 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 CCT7Q99832 543 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 TRMOQ9BU70 441 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 LIME1Q9H400 295 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 MKS1Q9NXB0 559 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 CLCF1Q9UBD9 225 aa18.75■□□□□ 0.59
SDCBP-209ENST00000522243 FOXD3Q9UJU5 478 aaPredicted RBP18.75■□□□□ 0.59
SDCBP-209ENST00000522243 MED12LQ86YW9 2145 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 LSM1O15116 133 aaKnown RBP18.74■□□□□ 0.59
SDCBP-209ENST00000522243 RCBTB2O95199 551 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 IL18BPO95998 194 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 NUDT17P0C025 328 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 PRPS2P11908 318 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 HK1P19367 917 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 EFNA1P20827 205 aaPredicted RBP18.74■□□□□ 0.59
SDCBP-209ENST00000522243 CHMP24386 653 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 B3GALT5-AS1P59052 145 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 IFFO1Q0D2I5 559 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 ARL13AQ5H913 290 aaPredicted RBP18.74■□□□□ 0.59
SDCBP-209ENST00000522243 RAET1LQ5VY80 246 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 ADGRE4PQ86SQ3 457 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 GALNT10Q86SR1 603 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 LUZP2Q86TE4 346 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 EXOC3L1Q86VI1 746 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 GRAMD2AQ8IUY3 354 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 UBQLNLQ8IYU4 475 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 RIBC1Q8N443 379 aaPredicted RBP18.74■□□□□ 0.59
SDCBP-209ENST00000522243 OR5M1Q8NGP8 315 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 TCP10LQ8TDR4 215 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 GPR151Q8TDV0 419 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 DUSP19Q8WTR2 217 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 TWIST2Q8WVJ9 160 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 WNT2BQ93097 391 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 RMND5BQ96G75 393 aaPredicted RBP18.74■□□□□ 0.59
SDCBP-209ENST00000522243 TM9SF2Q99805 663 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 SDHAF3Q9NRP4 125 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 GIMAP2Q9UG22 337 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 MRTO4Q9UKD2 239 aaKnown RBP18.74■□□□□ 0.59
SDCBP-209ENST00000522243 TRAF6Q9Y4K3 522 aa18.74■□□□□ 0.59
SDCBP-209ENST00000522243 OTOGQ6ZRI0 2925 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms