RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ZNF471Q9BX82 626 aaPredicted RBP13.06□□□□□ -0.32
SYNPO-205ENST00000522122 AKIP1Q9NQ31 210 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 CNIH4Q9P003 139 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 LYRM1O43325 122 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 PRKCAP17252 672 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 SOX3P41225 446 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 LRIF1Q5T3J3 769 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 DNAJC22Q8N4W6 341 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 METTL27Q8N6F8 245 aaPredicted RBP13.06□□□□□ -0.32
SYNPO-205ENST00000522122 SYT14Q8NB59 555 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 OR4K13Q8NH42 304 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 LKAAEAR1Q8TD35 194 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 TXNDC15Q96J42 360 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 SLC6A16Q9GZN6 736 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 KATNBL1Q9H079 304 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 P2RY12Q9H244 342 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 TEX13DA0A0J9YY54 714 aaPredicted RBP13.06□□□□□ -0.32
SYNPO-205ENST00000522122 TACR1P25103 407 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 FRKP42685 505 aaPredicted RBP13.06□□□□□ -0.32
SYNPO-205ENST00000522122 FXYD6P3P58550 94 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 OC90Q02509 493 aaPredicted RBP13.06□□□□□ -0.32
SYNPO-205ENST00000522122 SGCBQ16585 318 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 PUS10Q3MIT2 529 aaKnown RBP13.06□□□□□ -0.32
SYNPO-205ENST00000522122 HTR3DQ70Z44 454 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 METTL4Q8N3J2 472 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 OR5J2Q8NH18 312 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 TRIM43Q96BQ3 446 aaPredicted RBP13.06□□□□□ -0.32
SYNPO-205ENST00000522122 ZNF559Q9BR84 538 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 METTL7AQ9H8H3 244 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 RXFP3Q9NSD7 469 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 A3GALT2U3KPV4 340 aa13.06□□□□□ -0.32
SYNPO-205ENST00000522122 C9J4A7 227 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 TMX2-CTNND1H3BSU7 103 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 CAPNS1P04632 268 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 UCHL1P09936 223 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 ADORA3P0DMS8 318 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 BMP1P13497 986 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 C5AR1P21730 350 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 NTHL1P78549 312 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 LIPIQ6XZB0 460 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 ENTHD1Q8IYW4 607 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 CADM3Q8N126 398 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 OR2L8Q8NGY9 312 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 WDR20Q8TBZ3 569 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 HRASLS5Q96KN8 279 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 RNF121Q9H920 327 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 ABI3Q9P2A4 366 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 MGAT4CQ9UBM8 478 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 KNL1Q8NG31 2342 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 LATO43561 262 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 RUNX3Q13761 415 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 UBE2UQ5VVX9 321 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 LYSMD2Q8IV50 215 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 TMEM156Q8N614 296 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 ZNF480Q8WV37 535 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 ASB15Q8WXK1 588 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 CCDC120Q96HB5 630 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 PELOQ9BRX2 385 aaKnown RBP13.05□□□□□ -0.32
SYNPO-205ENST00000522122 SLC17A9Q9BYT1 436 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 DZANK1Q9NVP4 752 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 ASPDHA6ND91 283 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 METTL15A6NJ78 407 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 CASC3O15234 703 aaKnown RBP13.05□□□□□ -0.32
SYNPO-205ENST00000522122 CREBL2O60519 120 aaPredicted RBP13.05□□□□□ -0.32
SYNPO-205ENST00000522122 HMGN2P05204 90 aaKnown RBP13.05□□□□□ -0.32
SYNPO-205ENST00000522122 ENDOUP21128 410 aaKnown RBP13.05□□□□□ -0.32
SYNPO-205ENST00000522122 S100A10P60903 97 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 FIGLAQ6QHK4 219 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 TAS1R1Q7RTX1 841 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 POGLUT1Q8NBL1 392 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 OR2L2Q8NH16 312 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 ADAMTS19Q8TE59 1207 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 PMM1Q92871 262 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 ATG5Q9H1Y0 275 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 RABL2AQ9UBK7 228 aaPredicted RBP13.05□□□□□ -0.32
SYNPO-205ENST00000522122 RABL2BQ9UNT1 228 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 FNTBP49356 437 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 VAMP2P63027 116 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 GRIN2CQ14957 1233 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 STEAP3Q658P3 488 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 SLC46A3Q7Z3Q1 461 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 CASD1Q96PB1 797 aa13.05□□□□□ -0.32
SYNPO-205ENST00000522122 C14orf166Q9Y224 244 aaKnown RBP13.05□□□□□ -0.32
SYNPO-205ENST00000522122 TMEM221A6NGB7 291 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 FMO6PO60774 539 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 MAP4K2Q12851 820 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 CNIH2Q6PI25 160 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 DPPA4Q7L190 304 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 FKBP10Q96AY3 582 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 SORBS1Q9BX66 1292 aaKnown RBP13.04□□□□□ -0.32
SYNPO-205ENST00000522122 PINK1Q9BXM7 581 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 PTGES2Q9H7Z7 377 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 NTN4Q9HB63 628 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 PDFQ9HBH1 243 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 CORINQ9Y5Q5 1042 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 IGFBP6P24592 240 aaPredicted RBP13.04□□□□□ -0.32
SYNPO-205ENST00000522122 C1orf61Q13536 156 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 SLC5A12Q1EHB4 618 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 SLC22A10Q63ZE4 541 aa13.04□□□□□ -0.32
SYNPO-205ENST00000522122 ZNF584Q8IVC4 421 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms