RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	OIT3	Q8WWZ8	545 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	ANP32B	Q92688	251 aa	Known RBP	6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	CFAP36	Q96G28	342 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	OXNAD1	Q96HP4	312 aa	Predicted RBP	6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	MTERF1	Q99551	399 aa	Known RBP	6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	C1QTNF7	Q9BXJ2	289 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	CARD9	Q9H257	536 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	KRCC1	Q9NPI7	259 aa	Predicted RBP	6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	KLHL8	Q9P2G9	620 aa	Predicted RBP	6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	KLHL9	Q9P2J3	617 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	IL36RN	Q9UBH0	155 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	FAM153A	Q9UHL3	310 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	RPL26L1	Q9UNX3	145 aa	Known RBP	6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	IKBKG	Q9Y6K9	419 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	AKAP13	Q12802	2813 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	IGHV4-28	A0A0C4DH34	117 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	SPTY2D1-AS1	A0A0U1RR47	76 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	LOC285095	A0A1B0GVY8	99 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	C5orf60	A6NFR6	353 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	CFAP73	A6NFT4	308 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	ANKRD66	B4E2M5	251 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798		H0YIG0	161 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	PSMD11	O00231	422 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	ATP6AP2	O75787	350 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	WDPCP	O95876	746 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	CSF2	P04141	144 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	PCCB	P05166	539 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	ADRB1	P08588	477 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	ZNF30	P17039	623 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	TRIM23	P36406	574 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	ARRB1	P49407	418 aa	Predicted RBP	6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	SMS	P52788	366 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	STC1	P52823	247 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	NUDT6	P53370	316 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	VEZF1	Q14119	521 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	HNF4G	Q14541	408 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	SIX1	Q15475	284 aa	Predicted RBP	6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	OASL	Q15646	514 aa	Known RBP	6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	CEP78	Q5JTW2	689 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	WASHC2D	Q5SRD0	308 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	MACC1	Q6ZN28	852 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	PARG	Q86W56	976 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	MEX3D	Q86XN8	651 aa	Known RBP	6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	SLC13A5	Q86YT5	568 aa	Predicted RBP	6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	NAXD	Q8IW45	347 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	DAZL	Q92904	295 aa	Known RBP	6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	NUS1	Q96E22	293 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	ZNF559	Q9BR84	538 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	TSPYL1	Q9H0U9	437 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	GBA3	Q9H227	469 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	SERINC1	Q9NRX5	453 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	SLC35D1	Q9NTN3	355 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	UBQLN2	Q9UHD9	624 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	RSPH14	Q9UHP6	348 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	DNPEP	Q9ULA0	475 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	PYCARD	Q9ULZ3	195 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	OR1A2	Q9Y585	309 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	GOLGA4	Q13439	2230 aa	Known RBP	6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	CELSR3	Q9NYQ7	3312 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	ACACB	O00763	2458 aa		6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	TP53BP1	Q12888	1972 aa	Predicted RBP	6.55	□□□□□ -1.36
SPIDR-215	ENST00000521798	ZFHX4	Q86UP3	3567 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	TRAV24	A0A0B4J272	114 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	C1orf232	A0A0U1RR37	186 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	USP27X	A6NNY8	438 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	NPIPB8	E9PQR5	432 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	TMEM178B	H3BS89	294 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	YKT6	O15498	198 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	ZSCAN12	O43309	604 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	SDC3	O75056	442 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	WISP2	O76076	250 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	PTBP3	O95758	552 aa	Known RBP	6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	CH25H	O95992	272 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	SOD1	P00441	154 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	EPO	P01588	193 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	FGF2	P09038	288 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	PIRT	P0C851	137 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	GIMD1	P0DJR0	217 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	SMIM18	P0DKX4	95 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	CEACAM1	P13688	526 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	CYP2A7	P20853	494 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	KEL	P23276	732 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	DGKA	P23743	735 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	ADRA1A	P35348	466 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	RPL21	P46778	160 aa	Known RBP	6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	NOVA1	P51513	510 aa	Known RBP	6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	PROK1	P58294	105 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	DPT	Q07507	201 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	TSTA3	Q13630	321 aa	Predicted RBP	6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	NFATC4	Q14934	902 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	SLC1A5	Q15758	541 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	ZNF542P	Q5EBM4	170 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	KCTD16	Q68DU8	428 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	PNCK	Q6P2M8	343 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	MARK2	Q7KZI7	788 aa	Known RBP	6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	ANKRD46	Q86W74	232 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	COMMD2	Q86X83	199 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	KLHDC8B	Q8IXV7	354 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	ARHGAP24	Q8N264	748 aa		6.54	□□□□□ -1.36
SPIDR-215	ENST00000521798	SLC35F6	Q8N357	371 aa		6.54	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms