RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 A8MVJ9 347 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 FOXD2O60548 495 aaPredicted RBP15.31■□□□□ 0.04
USP42-207ENST00000521713 PAHP00439 452 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 AFF3P51826 1226 aaKnown RBP15.31■□□□□ 0.04
USP42-207ENST00000521713 FIGNL1Q6PIW4 674 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 LNX2Q8N448 690 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 CHDHQ8NE62 594 aaPredicted RBP15.31■□□□□ 0.04
USP42-207ENST00000521713 OR2T33Q8NG76 320 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 SGTBQ96EQ0 304 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 OR1F2PQ96R84 312 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 PPA2Q9H2U2 334 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 GSTO2Q9H4Y5 243 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 PCDH10Q9P2E7 1040 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 LAMP5Q9UJQ1 280 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 SH2B3Q9UQQ2 575 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 FARSAQ9Y285 508 aaKnown RBP15.31■□□□□ 0.04
USP42-207ENST00000521713 C1orf105O95561 183 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 TRA2BP62995 288 aaKnown RBP15.31■□□□□ 0.04
USP42-207ENST00000521713 MRPL58Q14197 206 aaKnown RBP15.31■□□□□ 0.04
USP42-207ENST00000521713 MS4A4EQ96PG1 132 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 OR4K3Q96R72 315 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 ZNF559Q9BR84 538 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 BEX2Q9BXY8 128 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 RGCCQ9H4X1 137 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 EEF1E1O43324 174 aaKnown RBP15.31■□□□□ 0.04
USP42-207ENST00000521713 RFPL3O75679 317 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 CSTBP04080 98 aaKnown RBP15.31■□□□□ 0.04
USP42-207ENST00000521713 SPARCP09486 303 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 UNKLQ9H9P5 680 aaKnown RBP15.31■□□□□ 0.04
USP42-207ENST00000521713 VILLO15195 856 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 FNTBP49356 437 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 ARF3P61204 181 aaPredicted RBP15.31■□□□□ 0.04
USP42-207ENST00000521713 ARF1P84077 181 aaKnown RBP15.31■□□□□ 0.04
USP42-207ENST00000521713 MAD2L1BPQ15013 274 aaPredicted RBP15.31■□□□□ 0.04
USP42-207ENST00000521713 FIP1L1Q6UN15 594 aaKnown RBP15.31■□□□□ 0.04
USP42-207ENST00000521713 PLPP6Q8IY26 295 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 ERVK13-1Q9NX77 482 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 QPCTLQ9NXS2 382 aa15.31■□□□□ 0.04
USP42-207ENST00000521713 BLACEA4D250 179 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 C1orf196B1AJZ1 125 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 SRPX2O60687 465 aaPredicted RBP15.3■□□□□ 0.04
USP42-207ENST00000521713 HTR1AP08908 422 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 GGT1P19440 569 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 MAOBP27338 520 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 SMAD4Q13485 552 aaKnown RBP15.3■□□□□ 0.04
USP42-207ENST00000521713 PROX2Q3B8N5 592 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 IER5LQ5T953 404 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 AGAP6Q5VW22 663 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 PAPD5Q8NDF8 572 aaKnown RBP15.3■□□□□ 0.04
USP42-207ENST00000521713 ZNF480Q8WV37 535 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 TCTEX1D2Q8WW35 142 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 MOCOSQ96EN8 888 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 AGAP4Q96P64 663 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 GPN2Q9H9Y4 310 aaPredicted RBP15.3■□□□□ 0.04
USP42-207ENST00000521713 PAPPA2Q9BXP8 1791 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 ZNF888P0CJ79 500 aaPredicted RBP15.3■□□□□ 0.04
USP42-207ENST00000521713 GMPRP36959 345 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 S100A10P60903 97 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 KEAP1Q14145 624 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 RPE65Q16518 533 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 LIPKQ5VXJ0 399 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 CD300LFQ8TDQ1 290 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 GATAD2BQ8WXI9 593 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 MYLIPQ8WY64 445 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 TFAP2CQ92754 450 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 TAS2R8Q9NYW2 309 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 TAF1P21675 1872 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 UNC119BA6NIH7 251 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 ANHXE9PGG2 379 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 ADORA3P0DMS8 318 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 DDCP20711 480 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 NCS1P62166 190 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 PRDX1Q06830 199 aaKnown RBP15.3■□□□□ 0.04
USP42-207ENST00000521713 ZNF77Q15935 545 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 SLC36A3Q495N2 470 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 SLC35F1Q5T1Q4 408 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 ADAMTSL4Q6UY14 1074 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 PPP1R3BQ86XI6 285 aa15.3■□□□□ 0.04
USP42-207ENST00000521713 NUFIP1Q9UHK0 495 aaKnown RBP15.3■□□□□ 0.04
USP42-207ENST00000521713 A0A0A6YYC8 382 aaPredicted RBP15.29■□□□□ 0.04
USP42-207ENST00000521713 I3L1I5 382 aaPredicted RBP15.29■□□□□ 0.04
USP42-207ENST00000521713 EIF1AYO14602 144 aaKnown RBP15.29■□□□□ 0.04
USP42-207ENST00000521713 PRAF2O60831 178 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 TGM6O95932 706 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 CELP19835 753 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 CERS1P27544 350 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 MMP12P39900 470 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 EIF1AXP47813 144 aaKnown RBP15.29■□□□□ 0.04
USP42-207ENST00000521713 CRISP1P54107 249 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 MFSD13AQ14CX5 517 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 SLC5A8Q8N695 610 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 ACOT4Q8N9L9 421 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 AGBL5Q8NDL9 886 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 CHPT1Q8WUD6 406 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 TMEM19Q96HH6 336 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 UHRF1Q96T88 793 aaPredicted RBP15.29■□□□□ 0.04
USP42-207ENST00000521713 CACNG6Q9BXT2 260 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 SDR39U1Q9NRG7 319 aaPredicted RBP15.29■□□□□ 0.04
USP42-207ENST00000521713 BTNL2Q9UIR0 455 aa15.29■□□□□ 0.04
USP42-207ENST00000521713 ACSL6Q9UKU0 697 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms