RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 VPS36Q86VN1 386 aa3.67□□□□□ -1.82
PTPN12-214ENST00000520947 AGAP11Q8TF27 550 aa3.67□□□□□ -1.82
PTPN12-214ENST00000520947 C9orf85Q96MD7 179 aa3.67□□□□□ -1.82
PTPN12-214ENST00000520947 APOL2Q9BQE5 337 aa3.67□□□□□ -1.82
PTPN12-214ENST00000520947 RPAP3Q9H6T3 665 aaPredicted RBP3.67□□□□□ -1.82
PTPN12-214ENST00000520947 LIN28AQ9H9Z2 209 aaKnown RBP3.67□□□□□ -1.82
PTPN12-214ENST00000520947 CUTCQ9NTM9 273 aa3.67□□□□□ -1.82
PTPN12-214ENST00000520947 AURKCQ9UQB9 309 aa3.67□□□□□ -1.82
PTPN12-214ENST00000520947 TRIM49BA6NDI0 452 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 K7EPI3 171 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 RHBDL1O75783 438 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 IFNB1P01574 187 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 ALPIP09923 528 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 GSTT2P0CG29 244 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 GSTT2BP0CG30 244 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 NCF1P14598 390 aaPredicted RBP3.66□□□□□ -1.82
PTPN12-214ENST00000520947 IGFBP5P24593 272 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 CYP2F1P24903 491 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 ADRA1AP35348 466 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 KRTAP12-2P59991 146 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 IL9RQ01113 521 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 PRKCEQ02156 737 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 SCGB2A2Q13296 93 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 RUNX3Q13761 415 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 TFDP1Q14186 410 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 SLC10A1Q14973 349 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 UBE2V2Q15819 145 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 CDKN3Q16667 212 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 MICAQ29983 383 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 RNF212Q495C1 297 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 HSP90AA5PQ58FG0 334 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 ARSKQ6UWY0 536 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 BTNL3Q6UXE8 466 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 CCDC110Q8TBZ0 833 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 GIPC3Q8TF64 312 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 TIGARQ9NQ88 270 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 POLE3Q9NRF9 147 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 C1orf123Q9NWV4 160 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 IMPAD1Q9NX62 359 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 ATP6V1HQ9UI12 483 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 ZNF107Q9UII5 783 aaPredicted RBP3.66□□□□□ -1.82
PTPN12-214ENST00000520947 NTNG1Q9Y2I2 539 aa3.66□□□□□ -1.82
PTPN12-214ENST00000520947 METP08581 1390 aa3.65□□□□□ -1.82
PTPN12-214ENST00000520947 ZSCAN5CA6NGD5 496 aaPredicted RBP3.65□□□□□ -1.83
PTPN12-214ENST00000520947 EFCAB7A8K855 629 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 WASH3PC4AMC7 463 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 SMPD2O60906 423 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 PRAMEF12O95522 483 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 AK1P00568 194 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 KRTAP1-4P0C5Y4 121 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 CYLC1P35663 651 aaPredicted RBP3.65□□□□□ -1.83
PTPN12-214ENST00000520947 PTGFRP43088 359 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 RPL34P49207 117 aaKnown RBP3.65□□□□□ -1.83
PTPN12-214ENST00000520947 ARHGDIBP52566 201 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 HSD17B7P56937 341 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 RPS6P62753 249 aaKnown RBP3.65□□□□□ -1.83
PTPN12-214ENST00000520947 RNLSQ5VYX0 342 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 WASH2PQ6VEQ5 465 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 LHFPL4Q7Z7J7 247 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 LCA5Q86VQ0 697 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 UNC5CLQ8IV45 518 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 EFCAB13Q8IY85 973 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 ZBTB44Q8NCP5 570 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 VSTM2LQ96N03 204 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 TESK2Q96S53 571 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 FICDQ9BVA6 458 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 TBC1D10AQ9BXI6 508 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 GPN2Q9H9Y4 310 aaPredicted RBP3.65□□□□□ -1.83
PTPN12-214ENST00000520947 MEPEQ9NQ76 525 aaPredicted RBP3.65□□□□□ -1.83
PTPN12-214ENST00000520947 BARX2Q9UMQ3 279 aaPredicted RBP3.65□□□□□ -1.83
PTPN12-214ENST00000520947 EXOSC1Q9Y3B2 195 aaKnown RBP3.65□□□□□ -1.83
PTPN12-214ENST00000520947 U3KQV3 271 aa3.65□□□□□ -1.83
PTPN12-214ENST00000520947 ABCA7Q8IZY2 2146 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 A0A087WZY1 265 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 TRBV7-9A0A0J9YWB2 115 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 A0A1B0GUL7 405 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 A0A1W2PQ72 361 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 LRRC30A6NM36 301 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 TM9SF1O15321 606 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 PPIHO43447 177 aaKnown RBP3.64□□□□□ -1.83
PTPN12-214ENST00000520947 LCMT2O60294 686 aaKnown RBP3.64□□□□□ -1.83
PTPN12-214ENST00000520947 IGHDP01880 384 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 HEXBP07686 556 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 IGFBP1P08833 259 aaPredicted RBP3.64□□□□□ -1.83
PTPN12-214ENST00000520947 LAMP1P11279 417 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 DPP4P27487 766 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 AXLP30530 894 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 OR1D4P47884 311 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 TRPC1P48995 793 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 METAP1P53582 386 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 PAX2Q02962 417 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 IL18R1Q13478 541 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 TRIP10Q15642 601 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 TIMM50Q3ZCQ8 353 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 GALNT17Q6IS24 598 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 SERINC5Q86VE9 423 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 CBWD2Q8IUF1 395 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 GCNT2Q8N0V5 402 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 RHOXF1Q8NHV9 184 aa3.64□□□□□ -1.83
PTPN12-214ENST00000520947 SYAP1Q96A49 352 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms