RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 FPR2P25090 351 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 PRDX2P32119 198 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 MAS1LP35410 378 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 KCNJ3P48549 501 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 HERV-K104P63124 156 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 HSD11B2P80365 405 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 CSTF1Q05048 431 aaKnown RBP4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 FUT7Q11130 342 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 DUSP8Q13202 625 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 NPTX1Q15818 432 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 DUSP6Q16828 381 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 MGAT5BQ3V5L5 792 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 ACER2Q5QJU3 275 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 PLA2G2CQ5R387 149 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 PAPD7Q5XG87 772 aaKnown RBP4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 ADHFE1Q8IWW8 467 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 GCNT2Q8N0V5 402 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 CPSF7Q8N684 471 aaKnown RBP4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR2L5Q8NG80 312 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR4A16Q8NH70 328 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC2A12Q8TD20 617 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC35F5Q8WV83 523 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 FAR1Q8WVX9 515 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 RASSF5Q8WWW0 418 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC38A4Q969I6 547 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 UBE2FQ969M7 185 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 GTPBP3Q969Y2 492 aaKnown RBP4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 FOXRED1Q96CU9 486 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 TOE1Q96GM8 510 aaKnown RBP4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 CDKN2AIPNLQ96HQ2 116 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 XPO6Q96QU8 1125 aaKnown RBP4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 DUSP26Q9BV47 211 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 METTL9Q9H1A3 318 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC38A1Q9H2H9 487 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 CRISPLD1Q9H336 500 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 UBE2ZQ9H832 354 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 RANGRFQ9HD47 186 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 GCM1Q9NP62 436 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 ACP6Q9NPH0 428 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR2S2Q9NQN1 319 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 CD274Q9NZQ7 290 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 RHCGQ9UBD6 479 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 PITPNC1Q9UKF7 332 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 FBXL3Q9UKT7 428 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 NME7Q9Y5B8 376 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 RALGAPA2Q2PPJ7 1873 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 VWA8A3KMH1 1905 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR2W5A6NFC9 320 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 SMIM23A6NLE4 172 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 A8MUA0 341 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 E5RJQ4 531 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 TRIM13O60858 407 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC43A1O75387 559 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ALX3O95076 343 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 SCELO95171 688 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 EFEMP2O95967 443 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF12P17014 697 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ADORA2BP29275 332 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 FCGR2BP31994 310 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 NTF4P34130 210 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 P2RY2P41231 377 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 CTSKP43235 329 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ASPAP45381 313 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 AP1S2P56377 157 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 NTHL1P78549 312 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 MEF2AQ02078 507 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 PRKCQQ04759 706 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 P2RY14Q15391 338 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 LTB4RQ15722 352 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 TRIM16LQ309B1 348 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 C5orf47Q569G3 176 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 CTSL3PQ5NE16 218 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ABHD17BQ5VST6 288 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 TIGD3Q6B0B8 471 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 TXNRD3NBQ6F5E7 133 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ANKRD26P1Q6NSI1 321 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 B3GLCTQ6Y288 498 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 USP43Q70EL4 1123 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ASRGL1Q7L266 308 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 GRASPQ7Z6J2 395 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ALYREFQ86V81 257 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 HORMAD1Q86X24 394 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZC3H3Q8IXZ2 948 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 SHISA5Q8N114 240 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 MREGQ8N565 214 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ATP6V0D2Q8N8Y2 350 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 C22orf15Q8WYQ4 148 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ORAI1Q96D31 301 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 PABPC5Q96DU9 382 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 C3orf30Q96M34 536 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF285Q96NJ3 590 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 MRPL13Q9BYD1 178 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 UBE2TQ9NPD8 197 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZC4H2Q9NQZ6 224 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 DYRK4Q9NR20 520 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 CISHQ9NSE2 258 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 STMN3Q9NZ72 180 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 CD207Q9UJ71 328 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 STOML2Q9UJZ1 356 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms