RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 TIMP4Q99727 224 aa6.11□□□□□ -1.43
NR1I3-229ENST00000511748 PELOQ9BRX2 385 aaKnown RBP6.11□□□□□ -1.43
NR1I3-229ENST00000511748 FAM167BQ9BTA0 163 aa6.11□□□□□ -1.43
NR1I3-229ENST00000511748 DOHHQ9BU89 302 aa6.11□□□□□ -1.43
NR1I3-229ENST00000511748 CAPS2Q9BXY5 557 aa6.11□□□□□ -1.43
NR1I3-229ENST00000511748 AMBRA1Q9C0C7 1298 aa6.11□□□□□ -1.43
NR1I3-229ENST00000511748 OR8D2Q9GZM6 311 aa6.11□□□□□ -1.43
NR1I3-229ENST00000511748 TINAGL1Q9GZM7 467 aaPredicted RBP6.11□□□□□ -1.43
NR1I3-229ENST00000511748 RHBGQ9H310 441 aa6.11□□□□□ -1.43
NR1I3-229ENST00000511748 GALNT9Q9HCQ5 603 aa6.11□□□□□ -1.43
NR1I3-229ENST00000511748 LYRM4Q9HD34 91 aa6.11□□□□□ -1.43
NR1I3-229ENST00000511748 SYBUQ9NX95 663 aa6.11□□□□□ -1.43
NR1I3-229ENST00000511748 ARL15Q9NXU5 204 aa6.11□□□□□ -1.43
NR1I3-229ENST00000511748 FETUBQ9UGM5 382 aa6.11□□□□□ -1.43
NR1I3-229ENST00000511748 PTBP2Q9UKA9 531 aaKnown RBP6.11□□□□□ -1.43
NR1I3-229ENST00000511748 ADAM21Q9UKJ8 722 aa6.11□□□□□ -1.43
NR1I3-229ENST00000511748 DOCK7Q96N67 2140 aa6.11□□□□□ -1.43
NR1I3-229ENST00000511748 DSCAMO60469 2012 aa6.11□□□□□ -1.43
NR1I3-229ENST00000511748 A0A1W2PS29 197 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 C17orf105B2RV13 164 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 G3V3Y1 287 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 CYR61O00622 381 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 CTIFO43310 598 aaKnown RBP6.1□□□□□ -1.43
NR1I3-229ENST00000511748 RCBTB2O95199 551 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 HPNP05981 417 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 CCL3P10147 92 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 MLNP12872 115 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 CYP4B1P13584 511 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 GNAZP19086 355 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 TNNI3P19429 210 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 GDF1P27539 372 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 RPL22P35268 128 aaKnown RBP6.1□□□□□ -1.43
NR1I3-229ENST00000511748 PTH2RP49190 550 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 HNMTP50135 292 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 MTTPP55157 894 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 RAB8AP61006 207 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 BTN3A2P78410 334 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 POU6F2P78424 691 aaPredicted RBP6.1□□□□□ -1.43
NR1I3-229ENST00000511748 BASP1P80723 227 aaKnown RBP6.1□□□□□ -1.43
NR1I3-229ENST00000511748 ZNF844Q08AG5 666 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 CUL1Q13616 776 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 DHX34Q14147 1143 aaKnown RBP6.1□□□□□ -1.43
NR1I3-229ENST00000511748 SPDYE7PQ495Y7 208 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 SEL1L2Q5TEA6 688 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 CAVIN1Q6NZI2 390 aaKnown RBP6.1□□□□□ -1.43
NR1I3-229ENST00000511748 ENPP6Q6UWR7 440 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 Q6YL49 198 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 PIWIL4Q7Z3Z4 852 aaKnown RBP6.1□□□□□ -1.43
NR1I3-229ENST00000511748 HIPK1Q86Z02 1210 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 CPNE9Q8IYJ1 553 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 KRT78Q8N1N4 520 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 CIARTQ8N365 385 aaPredicted RBP6.1□□□□□ -1.43
NR1I3-229ENST00000511748 BEND2Q8NDZ0 799 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 OR2L5Q8NG80 312 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 POC1BQ8TC44 478 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 SLC2A12Q8TD20 617 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 PTPMT1Q8WUK0 201 aaPredicted RBP6.1□□□□□ -1.43
NR1I3-229ENST00000511748 TMEM171Q8WVE6 324 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 MAIP1Q8WWC4 291 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 NEIL2Q969S2 332 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 PERPQ96FX8 193 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 TRIB1Q96RU8 372 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 NDNQ99608 321 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 SLC39A3Q9BRY0 314 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 NT5DC2Q9H857 520 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 COPS7BQ9H9Q2 264 aaPredicted RBP6.1□□□□□ -1.43
NR1I3-229ENST00000511748 XAB2Q9HCS7 855 aaKnown RBP6.1□□□□□ -1.43
NR1I3-229ENST00000511748 FANCFQ9NPI8 374 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 HOMER3Q9NSC5 361 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 MS4A12Q9NXJ0 267 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 GALPQ9UBC7 116 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 PACSIN3Q9UKS6 424 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 CORO1CQ9ULV4 474 aaPredicted RBP6.1□□□□□ -1.43
NR1I3-229ENST00000511748 DAPP1Q9UN19 280 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 MED16Q9Y2X0 877 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 ABCA1O95477 2261 aa6.1□□□□□ -1.43
NR1I3-229ENST00000511748 LRIT2A6NDA9 550 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 TRIM64A6NGJ6 449 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 TRIM64BA6NI03 449 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 LRRC3CA6NJW4 275 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 SDR42E2A6NKP2 422 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 OR6C76A6NM76 312 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 A8MXE2 369 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 GOLGA8KD6RF30 607 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 ERI3O43414 337 aaKnown RBP6.09□□□□□ -1.43
NR1I3-229ENST00000511748 PRKNO60260 465 aaPredicted RBP6.09□□□□□ -1.43
NR1I3-229ENST00000511748 TRIM3O75382 744 aaPredicted RBP6.09□□□□□ -1.43
NR1I3-229ENST00000511748 TRAPPC6AO75865 159 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 CPN1P15169 458 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 PPP3CBP16298 524 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 SAT1P21673 171 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 CRYGSP22914 178 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 PIGAP37287 484 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 HNF4AP41235 474 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 MSH2P43246 934 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 CDK9P50750 372 aaKnown RBP6.09□□□□□ -1.43
NR1I3-229ENST00000511748 NR1H2P55055 460 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 CRADDP78560 199 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 PLIN5Q00G26 463 aa6.09□□□□□ -1.43
NR1I3-229ENST00000511748 ASPHQ12797 758 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms