RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 PROX1Q92786 737 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 KAT2AQ92830 837 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 NKD1Q969G9 470 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 MAL2Q969L2 176 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 EME1Q96AY2 570 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 NACC2Q96BF6 587 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 TAMM41Q96BW9 452 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 CLIP3Q96DZ5 547 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 HSH2DQ96JZ2 352 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 C7orf34Q96L11 122 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 VSTM2LQ96N03 204 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 PTCHD1Q96NR3 888 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 SEPHS2Q99611 448 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 CTRCQ99895 268 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 G6PC3Q9BUM1 346 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 POLR2J2Q9GZM3 115 aaKnown RBP8.46□□□□□ -1.06
NR1I3-228ENST00000511676 ZNF350Q9GZX5 532 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 POLR2J3Q9H1A7 115 aaKnown RBP8.46□□□□□ -1.06
NR1I3-228ENST00000511676 SLC38A1Q9H2H9 487 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 MTHFD2LQ9H903 347 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-228ENST00000511676 IFT80Q9P2H3 777 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-228ENST00000511676 SEC14L3Q9UDX4 400 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 C19orf25Q9UFG5 118 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-228ENST00000511676 C15orf41Q9Y2V0 281 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 DTNAQ9Y4J8 743 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 PCDHGB7Q9Y5F8 929 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 NUP210LQ5VU65 1888 aa8.46□□□□□ -1.06
NR1I3-228ENST00000511676 A0A1W2PQ72 361 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 ARRDC5A6NEK1 342 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 TMEM229AB2RXF0 380 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 C9J4A7 227 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 M0QX08 132 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 MEN1O00255 615 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 KIAA0513O60268 411 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 RAD1O60671 282 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 STX11O75558 287 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 DNAJB5O75953 348 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 CST1P01037 141 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 C1QCP02747 245 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 IGKV3-11P04433 115 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 ZGLP1P0C6A0 271 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 FAM87AP0C7U9 286 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 ACP2P11117 423 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 ZNF26P17031 533 aaPredicted RBP8.45□□□□□ -1.06
NR1I3-228ENST00000511676 CD247P20963 164 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 MAOAP21397 527 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 RPS4Y1P22090 263 aaKnown RBP8.45□□□□□ -1.06
NR1I3-228ENST00000511676 PEX2P28328 305 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 TRHRP34981 398 aaPredicted RBP8.45□□□□□ -1.06
NR1I3-228ENST00000511676 OR1D4P47884 311 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 EMDP50402 254 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 ERFP50548 548 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 SMIM11AP58511 58 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 RPS26P62854 115 aaKnown RBP8.45□□□□□ -1.06
NR1I3-228ENST00000511676 KCNJ10P78508 379 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 MRPS35P82673 323 aaKnown RBP8.45□□□□□ -1.06
NR1I3-228ENST00000511676 FUT5Q11128 374 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 EPS8Q12929 822 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 DUSP8Q13202 625 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 NKG7Q16617 165 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 SYT16Q17RD7 645 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.45□□□□□ -1.06
NR1I3-228ENST00000511676 RFX4Q33E94 735 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 RNF220Q5VTB9 566 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 OR2T5Q6IEZ7 315 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 MRPL14Q6P1L8 145 aaKnown RBP8.45□□□□□ -1.06
NR1I3-228ENST00000511676 B3GNT8Q7Z7M8 397 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 HIPK1Q86Z02 1210 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 ZDHHC13Q8IUH4 622 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 KBTBD2Q8IY47 623 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 FAM86B1Q8N7N1 296 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 ZNF615Q8N8J6 731 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 COX18Q8N8Q8 333 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 SLC16A11Q8NCK7 471 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 ICA1LQ8NDH6 482 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 OR2T29Q8NH02 315 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 OR8K3Q8NH51 312 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 STT3BQ8TCJ2 826 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 SPPL2AQ8TCT8 520 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 PTPMT1Q8WUK0 201 aaPredicted RBP8.45□□□□□ -1.06
NR1I3-228ENST00000511676 DNAJC9Q8WXX5 260 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 SDCCAG3Q96C92 435 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 ZNF354BQ96LW1 612 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 EPYCQ99645 322 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 PSD2Q9BQI7 771 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 PINK1Q9BXM7 581 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 SEMA4CQ9C0C4 833 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 VN1R1Q9GZP7 353 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 GABARAPL1Q9H0R8 117 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 Q9H521 79 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 ARMC7Q9H6L4 198 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 Q9N2J8 555 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 NECTIN3Q9NQS3 549 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 SLC22A11Q9NSA0 550 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 OCIAD1Q9NX40 245 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 KLHL28Q9NXS3 571 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 MRTO4Q9UKD2 239 aaKnown RBP8.45□□□□□ -1.06
NR1I3-228ENST00000511676 SLC9A8Q9Y2E8 581 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 CLCA3PQ9Y6N3 262 aa8.45□□□□□ -1.06
NR1I3-228ENST00000511676 MAU2Q9Y6X3 613 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms