RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 DDHD1Q8NEL9 900 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 OR10Q1Q8NGQ4 319 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 CA5BP1Q8WTZ4 195 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 DYRK2Q92630 601 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 RAD54LQ92698 747 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 RBMXL1Q96E39 390 aaKnown RBP3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 PIWIL1Q96J94 861 aaKnown RBP3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 PRAC1Q96KF2 57 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 CCDC43Q96MW1 224 aaKnown RBP3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 PITPNM3Q9BZ71 974 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 KRT23Q9C075 422 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 MTMR12Q9C0I1 747 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 POLR3FQ9H1D9 316 aaPredicted RBP3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 SCRT2Q9NQ03 307 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 XPNPEP1Q9NQW7 623 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 APOBEC3BQ9UH17 382 aaKnown RBP3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 SH3BGRL2Q9UJC5 107 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 RASAL2Q9UJF2 1139 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 APPL1Q9UKG1 709 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 GRID1Q9ULK0 1009 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 HYDINQ4G0P3 5121 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 TRRAPQ9Y4A5 3859 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 MYOFQ9NZM1 2061 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 RP1P56715 2156 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 A0A087WW49 117 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 TRAV34A0A0B4J273 112 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 IGHV5-10-1A0A0J9YXX1 117 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 SPTY2D1-AS1A0A0U1RR47 76 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 SLCO1B7G3V0H7 640 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 NR5A2O00482 541 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 ZW10O43264 779 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 COCHO43405 550 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 KLHL41O60662 606 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 GLRA3O75311 464 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 CTAG2O75638 210 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 CDC123O75794 336 aaPredicted RBP3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 CDK2AP2O75956 126 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 MOCS3O95396 460 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 BAG2O95816 211 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 APOHP02749 345 aaPredicted RBP3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 HMBSP08397 361 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 PLEKP08567 350 aaPredicted RBP3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 FAM58BPP0C7Q3 252 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 ZNF26P17031 533 aaPredicted RBP3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 CYP3A5P20815 502 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 HNRNPA2B1P22626 353 aaKnown RBP3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 NKX2-1P43699 371 aaPredicted RBP3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 TSFMP43897 325 aaKnown RBP3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 PSMD8P48556 350 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 MTCP1P56278 107 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 PMP22Q01453 160 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 ILF2Q12905 390 aaKnown RBP3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 TNK1Q13470 666 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 TUBB2AQ13885 445 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 PDIA5Q14554 519 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 CCDC92Q53HC0 331 aaPredicted RBP3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 MPP7Q5T2T1 576 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 OR6B2Q6IFH4 312 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 UGT3A1Q6NUS8 523 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 IGFL3Q6UXB1 125 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 GCNT7Q6ZNI0 430 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 Q6ZS92 163 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 Q6ZSR6 202 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 NRARPQ7Z6K4 114 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 ACOT1Q86TX2 421 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 ZSCAN30Q86W11 494 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 CREBRFQ8IUR6 639 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 MMAAQ8IVH4 418 aaKnown RBP3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 OR8H3Q8N146 312 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 ZADH2Q8N4Q0 377 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 BCORP1Q8N888 145 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 NOA1Q8NC60 698 aaKnown RBP3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 OR13C3Q8NGS6 347 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 CRYGNQ8WXF5 182 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 INTS14Q96SY0 518 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 MAP3K3Q99759 626 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 CITED2Q99967 270 aaPredicted RBP3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 INPP5KQ9BT40 448 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 THUMPD3Q9BV44 507 aaKnown RBP3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 TUBB2BQ9BVA1 445 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 BARHL1Q9BZE3 327 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 ANAPC1Q9H1A4 1944 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 ACTL8Q9H568 366 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 ATP13A3Q9H7F0 1226 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 RDH14Q9HBH5 336 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 INTS10Q9NVR2 710 aaKnown RBP3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 GTF3C4Q9UKN8 822 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 UBQLN1Q9UMX0 589 aaKnown RBP3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 TNNQ9UQP3 1299 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 CHKBQ9Y259 395 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 PYGO1Q9Y3Y4 419 aa3.06□□□□□ -1.92
TOPBP1-208ENST00000511439 CITO14578 2027 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 LOC100653049A0A140TA62 436 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 A0A1W2PPW3 197 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 MEIOCA2RUB1 952 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 C5orf52A6NGY3 159 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 C21orf140B9A014 251 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 SLC31A1O15431 190 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 STX6O43752 255 aa3.05□□□□□ -1.92
TOPBP1-208ENST00000511439 PRAF2O60831 178 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms