RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 PRAMEF11O60813 436 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 PALMO75781 387 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 WDPCPO95876 746 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 IL4RP24394 825 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 KPNA2P52292 529 aaKnown RBP5.54□□□□□ -1.52
USP53-206ENST00000510737 DCDP81605 110 aaKnown RBP5.54□□□□□ -1.52
USP53-206ENST00000510737 GCNT1Q02742 428 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 CACNG1Q06432 222 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 PARP15Q460N3 678 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 LRRC66Q68CR7 880 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 WASH2PQ6VEQ5 465 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 CCDC71Q8IV32 467 aaPredicted RBP5.54□□□□□ -1.52
USP53-206ENST00000510737 UMODL1-AS1Q8N2C9 162 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 PYROXD2Q8N2H3 581 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 RTL3Q8N8U3 475 aaKnown RBP5.54□□□□□ -1.52
USP53-206ENST00000510737 LINC00301Q8NCQ3 95 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 C1orf131Q8NDD1 294 aaKnown RBP5.54□□□□□ -1.52
USP53-206ENST00000510737 DDHD1Q8NEL9 900 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 ANKRD20A12PQ8NF67 263 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 OR11G2Q8NGC1 345 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 ZCCHC10Q8TBK6 192 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 CXorf40BQ96DE9 158 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 TBC1D31Q96DN5 1066 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 MCCC1Q96RQ3 725 aaPredicted RBP5.54□□□□□ -1.52
USP53-206ENST00000510737 C17orf62Q9BQA9 187 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 GPR63Q9BZJ6 419 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 LRRC19Q9H756 370 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 PLEKHF2Q9H8W4 249 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 SOHLH2Q9NX45 425 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 NPIPA1Q9UND3 350 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 AAR2Q9Y312 384 aaKnown RBP5.54□□□□□ -1.52
USP53-206ENST00000510737 PPIL1Q9Y3C6 166 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 FAM170AA1A519 330 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 OR6C74A6NCV1 312 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 TRIM64A6NGJ6 449 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 TRIM64BA6NI03 449 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 CHUKO15111 745 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 CETN3O15182 167 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 SPRY1O43609 319 aaPredicted RBP5.53□□□□□ -1.52
USP53-206ENST00000510737 HCRTR1O43613 425 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 PDE9AO76083 593 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 PYGLP06737 847 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 HBQ1P09105 142 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 EPB41P11171 864 aaKnown RBP5.53□□□□□ -1.52
USP53-206ENST00000510737 PVRP15151 417 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 ABOP16442 354 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 ZNF7P17097 686 aaPredicted RBP5.53□□□□□ -1.52
USP53-206ENST00000510737 NR2C2P49116 596 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 NKAIN1Q4KMZ8 207 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 RHBDD2Q6NTF9 364 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 KLHL35Q6PF15 583 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 PAPD4Q6PIY7 484 aaKnown RBP5.53□□□□□ -1.52
USP53-206ENST00000510737 ARSKQ6UWY0 536 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 ZNF547Q8IVP9 402 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 SIAH3Q8IW03 269 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 CLYBLQ8N0X4 340 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 RPRMLQ8N4K4 120 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 CCDC185Q8N715 623 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 FAM222BQ8WU58 562 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 PIH1D2Q8WWB5 315 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 KLHL29Q96CT2 875 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 TRIM51Q9BSJ1 452 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 PLA2G12AQ9BZM1 189 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 SLC39A8Q9C0K1 460 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 OR2AG1Q9H205 316 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 FANCEQ9HB96 536 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 SYTL2Q9HCH5 934 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 SAMSN1Q9NSI8 373 aaKnown RBP5.53□□□□□ -1.52
USP53-206ENST00000510737 DHCR7Q9UBM7 475 aaKnown RBP5.53□□□□□ -1.52
USP53-206ENST00000510737 SMC3Q9UQE7 1217 aa5.53□□□□□ -1.52
USP53-206ENST00000510737 MRPS2Q9Y399 296 aaKnown RBP5.53□□□□□ -1.52
USP53-206ENST00000510737 CNTRLQ7Z7A1 2325 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 DOCK10Q96BY6 2186 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 SVEP1Q4LDE5 3571 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 A0A1W2PQ67 120 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 H7C423 109 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 M0QZ24 198 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 TSPAN12O95859 305 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 IDSP22304 550 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 LMAN1P49257 510 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 STC1P52823 247 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 CTSCP53634 463 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 DCAF7P61962 342 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 AP1S1P61966 158 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 SLC10A7Q0GE19 358 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 SYCP1Q15431 976 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 C15orf59Q2T9L4 293 aaPredicted RBP5.52□□□□□ -1.53
USP53-206ENST00000510737 KIAA1644Q3SXP7 199 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 CCDC14Q49A88 953 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 C2CD6Q53TS8 623 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 SHISA6Q6ZSJ9 500 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 CDHR3Q6ZTQ4 885 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 EMC1Q8N766 993 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 TEKT4Q8WW24 435 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 CELF6Q96J87 481 aaKnown RBP5.52□□□□□ -1.53
USP53-206ENST00000510737 PSKH2Q96QS6 385 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 CABLES2Q9BTV7 478 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 AP1M1Q9BXS5 423 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 RAD21L1Q9H4I0 556 aa5.52□□□□□ -1.53
USP53-206ENST00000510737 SYNCQ9H7C4 482 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms