RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 CALHM2Q9HA72 323 aa20.87■□□□□ 0.93
SNF8-209ENST00000510558 SH3BP4Q9P0V3 963 aa20.87■□□□□ 0.93
SNF8-209ENST00000510558 DKKL1Q9UK85 242 aa20.87■□□□□ 0.93
SNF8-209ENST00000510558 CSMD2Q7Z408 3487 aa20.87■□□□□ 0.93
SNF8-209ENST00000510558 MBD3L4A6NDZ8 208 aaPredicted RBP20.86■□□□□ 0.93
SNF8-209ENST00000510558 MBD3L3A6NE82 208 aaPredicted RBP20.86■□□□□ 0.93
SNF8-209ENST00000510558 MBD3L5A6NJ08 208 aaPredicted RBP20.86■□□□□ 0.93
SNF8-209ENST00000510558 C17orf51A8MQB3 221 aa20.86■□□□□ 0.93
SNF8-209ENST00000510558 B4DXG7 233 aa20.86■□□□□ 0.93
SNF8-209ENST00000510558 SCO2O43819 266 aa20.86■□□□□ 0.93
SNF8-209ENST00000510558 GPC1P35052 558 aa20.86■□□□□ 0.93
SNF8-209ENST00000510558 ZNF136P52737 540 aa20.86■□□□□ 0.93
SNF8-209ENST00000510558 MYBPHQ13203 477 aa20.86■□□□□ 0.93
SNF8-209ENST00000510558 PDE7AQ13946 482 aa20.86■□□□□ 0.93
SNF8-209ENST00000510558 OR4K17Q8NGC6 315 aa20.86■□□□□ 0.93
SNF8-209ENST00000510558 MBD3L2Q8NHZ7 208 aaPredicted RBP20.86■□□□□ 0.93
SNF8-209ENST00000510558 ZPLD1Q8TCW7 415 aa20.86■□□□□ 0.93
SNF8-209ENST00000510558 ZBED6CLQ96FA7 236 aaPredicted RBP20.86■□□□□ 0.93
SNF8-209ENST00000510558 TMEM109Q9BVC6 243 aa20.86■□□□□ 0.93
SNF8-209ENST00000510558 EQTNQ9NQ60 294 aa20.86■□□□□ 0.93
SNF8-209ENST00000510558 FLRT3Q9NZU0 649 aa20.86■□□□□ 0.93
SNF8-209ENST00000510558 PPP4R1LQ9P1A2 415 aa20.86■□□□□ 0.93
SNF8-209ENST00000510558 ZNF629Q9UEG4 869 aaPredicted RBP20.86■□□□□ 0.93
SNF8-209ENST00000510558 MRTO4Q9UKD2 239 aaKnown RBP20.86■□□□□ 0.93
SNF8-209ENST00000510558 ABCG2Q9UNQ0 655 aa20.86■□□□□ 0.93
SNF8-209ENST00000510558 MRPS18CQ9Y3D5 142 aaKnown RBP20.86■□□□□ 0.93
SNF8-209ENST00000510558 L3MBTL1Q9Y468 752 aa20.86■□□□□ 0.93
SNF8-209ENST00000510558 PCNX3Q9H6A9 2034 aa20.86■□□□□ 0.93
SNF8-209ENST00000510558 TTC36A6NLP5 189 aa20.85■□□□□ 0.93
SNF8-209ENST00000510558 FADS1O60427 444 aa20.85■□□□□ 0.93
SNF8-209ENST00000510558 BCKDHAP12694 445 aa20.85■□□□□ 0.93
SNF8-209ENST00000510558 DPP4P27487 766 aa20.85■□□□□ 0.93
SNF8-209ENST00000510558 ARRB2P32121 409 aa20.85■□□□□ 0.93
SNF8-209ENST00000510558 SERPINB5P36952 375 aa20.85■□□□□ 0.93
SNF8-209ENST00000510558 FRKP42685 505 aaPredicted RBP20.85■□□□□ 0.93
SNF8-209ENST00000510558 ASMTP46597 345 aa20.85■□□□□ 0.93
SNF8-209ENST00000510558 ASCL1P50553 236 aa20.85■□□□□ 0.93
SNF8-209ENST00000510558 SRYQ05066 204 aa20.85■□□□□ 0.93
SNF8-209ENST00000510558 POMZP3Q6PJE2 187 aa20.85■□□□□ 0.93
SNF8-209ENST00000510558 MREGQ8N565 214 aa20.85■□□□□ 0.93
SNF8-209ENST00000510558 PPP3R2Q96LZ3 170 aa20.85■□□□□ 0.93
SNF8-209ENST00000510558 SFXN2Q96NB2 322 aa20.85■□□□□ 0.93
SNF8-209ENST00000510558 TUBA1CQ9BQE3 449 aa20.85■□□□□ 0.93
SNF8-209ENST00000510558 GIMAP2Q9UG22 337 aa20.85■□□□□ 0.93
SNF8-209ENST00000510558 TACC2O95359 2948 aa20.85■□□□□ 0.93
SNF8-209ENST00000510558 H0Y3Z8 333 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 TYROBPO43914 113 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 IL33O95760 270 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 BPGMP07738 259 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 PRPS2P11908 318 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 TCEA1P23193 301 aaKnown RBP20.84■□□□□ 0.93
SNF8-209ENST00000510558 GABRA3P34903 492 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 RFX3P48380 749 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 STARP49675 285 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 LHX2P50458 406 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 MANFP55145 182 aaKnown RBP20.84■□□□□ 0.93
SNF8-209ENST00000510558 XKR7Q5GH72 579 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 CES4AQ5XG92 561 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 AAGABQ6PD74 315 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 ARSKQ6UWY0 536 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 FADS6Q8N9I5 356 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 C9orf106Q8NAJ2 232 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 MTERF3Q96E29 417 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 SH3GL2Q99962 352 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 C3orf14Q9HBI5 128 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 SDHAF3Q9NRP4 125 aa20.84■□□□□ 0.93
SNF8-209ENST00000510558 ACSS1Q9NUB1 689 aaPredicted RBP20.84■□□□□ 0.93
SNF8-209ENST00000510558 FAM120CQ9NX05 1096 aaKnown RBP20.84■□□□□ 0.93
SNF8-209ENST00000510558 RPH3AQ9Y2J0 694 aaPredicted RBP20.84■□□□□ 0.93
SNF8-209ENST00000510558 ANKRD17O75179 2603 aaKnown RBP20.84■□□□□ 0.93
SNF8-209ENST00000510558 MED12LQ86YW9 2145 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 GXYLT2A0PJZ3 443 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 TMEM114B3SHH9 223 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 SYT5O00445 386 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 ZNF500O60304 480 aaPredicted RBP20.83■□□□□ 0.93
SNF8-209ENST00000510558 ZIC3O60481 467 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 UQCRC1P31930 480 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 ETV4P43268 484 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 PSMD4P55036 377 aaKnown RBP20.83■□□□□ 0.93
SNF8-209ENST00000510558 DSCR4P56555 118 aaPredicted RBP20.83■□□□□ 0.93
SNF8-209ENST00000510558 STX5Q13190 355 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 KRT71Q3SY84 523 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 SZRD1Q7Z422 152 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 R3HCC1LQ7Z5L2 792 aaKnown RBP20.83■□□□□ 0.93
SNF8-209ENST00000510558 NUP43Q8NFH3 380 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 OR2M3Q8NG83 312 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 CEP70Q8NHQ1 597 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 HOXB13Q92826 284 aaPredicted RBP20.83■□□□□ 0.93
SNF8-209ENST00000510558 LRRC46Q96FV0 321 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 RTN4RQ9BZR6 473 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 DSN1Q9H410 356 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 ZDHHC2Q9UIJ5 367 aa20.83■□□□□ 0.93
SNF8-209ENST00000510558 OTOGQ6ZRI0 2925 aa20.83■□□□□ 0.92
SNF8-209ENST00000510558 CCDC168Q8NDH2 2452 aa20.82■□□□□ 0.92
SNF8-209ENST00000510558 PEX11AO75192 247 aa20.82■□□□□ 0.92
SNF8-209ENST00000510558 SKAP2O75563 359 aaPredicted RBP20.82■□□□□ 0.92
SNF8-209ENST00000510558 KCNH1O95259 989 aa20.82■□□□□ 0.92
SNF8-209ENST00000510558 CHMP24386 653 aa20.82■□□□□ 0.92
SNF8-209ENST00000510558 CTSSP25774 331 aa20.82■□□□□ 0.92
SNF8-209ENST00000510558 MAPK1P28482 360 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms