RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 GALNT8Q9NY28 637 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 MED11Q9P086 117 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 MRTO4Q9UKD2 239 aaKnown RBP13.94□□□□□ -0.18
TPM3-219ENST00000509409 EMCNQ9ULC0 261 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 C19orf53Q9UNZ5 99 aaPredicted RBP13.94□□□□□ -0.18
TPM3-219ENST00000509409 WBP11Q9Y2W2 641 aaKnown RBP13.94□□□□□ -0.18
TPM3-219ENST00000509409 C17orf51A8MQB3 221 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 H3BQF6 201 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 SEC22BO75396 215 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 SMNDC1O75940 238 aaKnown RBP eCLIP13.93□□□□□ -0.18
TPM3-219ENST00000509409 SLITRK5O94991 958 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 RAF1P04049 648 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 ZNF708P17019 499 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 KLK2P20151 261 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 CLDN18P56856 261 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 PSG6Q00889 435 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 POU4F3Q15319 338 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 BCL2A1Q16548 175 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 CCDC153Q494R4 210 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 RAET1LQ5VY80 246 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 NOXRED1Q6NXP6 359 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 MEIOBQ8N635 442 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 CNEP1R1Q8N9A8 125 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 FAM76AQ8TAV0 307 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 DUSP19Q8WTR2 217 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 DACH2Q96NX9 599 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 G6PC3Q9BUM1 346 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 PTGES2Q9H7Z7 377 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 Q9N2J8 555 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 CLCF1Q9UBD9 225 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 NDRG3Q9UGV2 375 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 AKAP6Q13023 2319 aa13.93□□□□□ -0.18
TPM3-219ENST00000509409 MED12Q93074 2177 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 SH3D21A4FU49 640 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 SMIM23A6NLE4 172 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 UPK1AO00322 258 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 RSL1D1O76021 490 aaKnown RBP13.92□□□□□ -0.18
TPM3-219ENST00000509409 TGM6O95932 706 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 PROCP04070 461 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 UROSP10746 265 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 CPOXP36551 454 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 PSMD4P55036 377 aaKnown RBP13.92□□□□□ -0.18
TPM3-219ENST00000509409 EEFSECP57772 596 aaKnown RBP13.92□□□□□ -0.18
TPM3-219ENST00000509409 PAMR1Q6UXH9 720 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 FRMD7Q6ZUT3 714 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 TRIM46Q7Z4K8 759 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 MARCH3Q86UD3 253 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 GSPT2Q8IYD1 628 aaKnown RBP13.92□□□□□ -0.18
TPM3-219ENST00000509409 OR2M3Q8NG83 312 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 MZB1Q8WU39 189 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 UBLCP1Q8WVY7 318 aaPredicted RBP13.92□□□□□ -0.18
TPM3-219ENST00000509409 GFM2Q969S9 779 aaKnown RBP13.92□□□□□ -0.18
TPM3-219ENST00000509409 ELP4Q96EB1 424 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 AMDHD1Q96NU7 426 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 ALPK1Q96QP1 1244 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 TXLNGYQ9BZA5 131 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 C3orf14Q9HBI5 128 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 MYNNQ9NPC7 610 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 TAS2R7Q9NYW3 318 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 PACSIN3Q9UKS6 424 aa13.92□□□□□ -0.18
TPM3-219ENST00000509409 EIF3LQ9Y262 564 aaKnown RBP13.92□□□□□ -0.18
TPM3-219ENST00000509409 ANKHD1Q8IWZ3 2542 aaKnown RBP13.92□□□□□ -0.18
TPM3-219ENST00000509409 SETD2Q9BYW2 2564 aaPredicted RBP13.91□□□□□ -0.18
TPM3-219ENST00000509409 A0A1W2PNV4 684 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 SLC22A20A6NK97 555 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 A8MXE2 369 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 SLC28A1O00337 649 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 FADS1O60427 444 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 PLIN3O60664 434 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 GOSR1O95249 250 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 CPA3P15088 417 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 GABRA3P34903 492 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 GPC1P35052 558 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 B3GALT5-AS1P59052 145 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 DNAJB13P59910 316 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 OR2A2Q6IF42 318 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 OR2L13Q8N349 312 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 FADS6Q8N9I5 356 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 OR5M1Q8NGP8 315 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.91□□□□□ -0.182e-8■■■■□ 26.5
TPM3-219ENST00000509409 RNF138Q8WVD3 245 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 MBD6Q96DN6 1003 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 FAM111AQ96PZ2 611 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 TBL1XR1Q9BZK7 514 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 C12orf65Q9H3J6 166 aaKnown RBP13.91□□□□□ -0.18
TPM3-219ENST00000509409 EQTNQ9NQ60 294 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 FLRT3Q9NZU0 649 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 ABCG2Q9UNQ0 655 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 FIS1Q9Y3D6 152 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 ZNF337Q9Y3M9 751 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 KIAA1549Q9HCM3 1950 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 MPDZO75970 2070 aa13.91□□□□□ -0.18
TPM3-219ENST00000509409 ITPR3Q14573 2671 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 H3BML4 177 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 COPEO14579 308 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 MSTNO14793 375 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 SEC14L5O43304 696 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 RGS14O43566 566 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 GMFGO60234 142 aa13.9□□□□□ -0.18
TPM3-219ENST00000509409 KCNH1O95259 989 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms