RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ENTPD4Q9Y227 616 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 TMED5Q9Y3A6 229 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 GPR45Q9Y5Y3 372 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 KCNE3Q9Y6H6 103 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 CSMD2Q7Z408 3487 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 UNC79Q9P2D8 2635 aa6.6□□□□□ -1.35
TOPBP1-207ENST00000509162 ESPL1Q14674 2120 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 C2orf92A0A1B0GVN3 265 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 HMGB1P1B2RPK0 211 aaPredicted RBP6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 NPIPA5E9PKD4 350 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 HDAC3O15379 428 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 KLHL41O60662 606 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 ICOSLGO75144 302 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 GUCY1B2O75343 617 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 UNC5CO95185 931 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 BPNT1O95861 308 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 ABCB1P08183 1280 aaPredicted RBP6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 GSTP1P09211 210 aaKnown RBP6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 IFI6P09912 130 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 CYP4B1P13584 511 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 PTPN6P29350 595 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 NTSP30990 170 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 MAGEA5P43359 124 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 GSTM5P46439 218 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 MAN2A2P49641 1150 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 CLDN8P56748 225 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 UFM1P61960 85 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 PPP2R2AP63151 447 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 HBA1P69905 142 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 PLCXD2Q0VAA5 305 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 RPS6KA2Q15349 733 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 MAPK11Q15759 364 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 C3AR1Q16581 482 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 MAPKAPK3Q16644 382 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 DUSP5Q16690 384 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 EMC4Q5J8M3 183 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 C1QL3Q5VWW1 255 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 MFSD12Q6NUT3 480 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 FAM47EQ6ZV65 393 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 TRILQ7L0X0 811 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 SLC29A4Q7RTT9 530 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 ANKRD46Q86W74 232 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 GPALPP1Q8IXQ4 340 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 C10orf111Q8N326 155 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 TMEM156Q8N614 296 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 OR5AK3PQ8NH89 298 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 RFWD2Q8NHY2 731 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 PSMA8Q8TAA3 256 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 PPP1R14CQ8TAE6 165 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 SLC22A8Q8TCC7 542 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 CKAP2Q8WWK9 683 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 PIK3R3Q92569 461 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 TMBIM1Q969X1 311 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 TP53INP1Q96A56 240 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 EFHD2Q96C19 240 aaPredicted RBP6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 SLC35A4Q96G79 324 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 MAGED4Q96JG8 741 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 LCORQ96JN0 433 aaPredicted RBP6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 BBS4Q96RK4 519 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 NPAS1Q99742 590 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 TM9SF2Q99805 663 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 STMN4Q9H169 189 aaPredicted RBP6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 SLC6A15Q9H2J7 730 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 CLMPQ9H6B4 373 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 MANSC1Q9H8J5 431 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 ZDHHC11Q9H8X9 412 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 SLC52A3Q9NQ40 469 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 EQTNQ9NQ60 294 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 SERHLQ9NQF3 203 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 PFDN4Q9NQP4 134 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 THAP1Q9NVV9 213 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 TINAGQ9UJW2 476 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 NPIPA1Q9UND3 350 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 ZNF835Q9Y2P0 537 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 NPFFR2Q9Y5X5 522 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 USH1CQ9Y6N9 552 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 ZNF780BQ9Y6R6 833 aa6.59□□□□□ -1.35
TOPBP1-207ENST00000509162 CRYBG3Q68DQ2 2970 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 DCHS2Q6V1P9 2916 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 NPIPA5A0A0B4J1W7 369 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 ANKUB1A6NFN9 424 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 NPIPA7E9PJI5 369 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 BCAS1O75363 584 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 ERN1O75460 977 aaKnown RBP6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 PPM1BO75688 479 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 NKX2-2O95096 273 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 CLDN1O95832 211 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 CHEK2O96017 543 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 LDLRP01130 860 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 STSP08842 583 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 NPIPA8P0DM63 369 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 PRPS2P11908 318 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 ZNF24P17028 368 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 LBPP18428 481 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 EPHA1P21709 976 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 DRD5P21918 477 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 HPCAL1P37235 193 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 ADH7P40394 386 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 CASP3P42574 277 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 PPICP45877 212 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms