RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 TMPRSS3P57727 454 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 STX1BP61266 288 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 OLR1P78380 273 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 SLC25A3Q00325 362 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 PLIN5Q00G26 463 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 RHAGQ02094 409 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 PDE7AQ13946 482 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 NSDHLQ15738 373 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 CEBPEQ15744 281 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 EXT1Q16394 746 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 SYT16Q17RD7 645 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 LSM12Q3MHD2 195 aaKnown RBP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 SLC9B1Q4ZJI4 515 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 PDCD4Q53EL6 469 aaKnown RBP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 C6orf163Q5TEZ5 329 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 MFSD4BQ5TF39 518 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 RNF220Q5VTB9 566 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 C18orf63Q68DL7 685 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 LCN10Q6JVE6 187 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 SLC48A1Q6P1K1 146 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 MSANTD1Q6ZTZ1 278 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 NDUFAF7Q7L592 441 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 MAVSQ7Z434 540 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 CPEB2Q7Z5Q1 589 aaKnown RBP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 CAMKMTQ7Z624 323 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 CLNKQ7Z7G1 428 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 ST13P4Q8IZP2 240 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 LIX1Q8N485 282 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 METTL27Q8N6F8 245 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 FAM47BQ8NA70 645 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 VPS37AQ8NEZ2 397 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 ZFP28Q8NHY6 868 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 SNRNP27Q8WVK2 155 aaKnown RBP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 LRTOMTQ8WZ04 291 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 TESCQ96BS2 214 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 ZBED6CLQ96FA7 236 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 RBM18Q96H35 190 aaKnown RBP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 FER1L6-AS2Q96M78 137 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 RILPQ96NA2 401 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 ZBTB18Q99592 522 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 LPAR4Q99677 370 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 TUBB6Q9BUF5 446 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 ZNF747Q9BV97 191 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 SORBS1Q9BX66 1292 aaKnown RBP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 ALOXE3Q9BYJ1 711 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 DPY30Q9C005 99 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 VN1R1Q9GZP7 353 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 C11orf54Q9H0W9 315 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 WDR55Q9H6Y2 383 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 AKIRIN1Q9H9L7 192 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 ADAP2Q9NPF8 381 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 SLC35C2Q9NQQ7 365 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 SDR39U1Q9NRG7 319 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 ACSS1Q9NUB1 689 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 FGFR1OP2Q9NVK5 253 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 AIG1Q9NVV5 245 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 FAM30AQ9NZY2 134 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 ATP6V1HQ9UI12 483 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 ADAM21Q9UKJ8 722 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 CES1P1Q9UKY3 287 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 PPIEQ9UNP9 301 aaKnown RBP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 ENTPD4Q9Y227 616 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 POLR3HQ9Y535 204 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 PTGDR2Q9Y5Y4 395 aa5.11□□□□□ -1.59
HMGB1P44-201ENST00000508597 A0A0G2JND7 137 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 TTC36A6NLP5 189 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 GABRR3A8MPY1 467 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 K7ENP7 123 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 SCAMP2O15127 329 aaKnown RBP5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 PGRMC2O15173 223 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 LAMA5O15230 3695 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 SNX3O60493 162 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 CCDC22O60826 627 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 B4GALT2O60909 372 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 CNOT3O75175 753 aaKnown RBP5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 JRKO75564 520 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 FAM107AO95990 144 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 HPP00738 406 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 GBAP04062 536 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 ATP1B1P05026 303 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 IL6P05231 212 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 CD1AP06126 327 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 CPMP14384 443 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 PORP16435 677 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 F8A1P23610 371 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 NTSP30990 170 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 FRKP42685 505 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 ALDH9A1P49189 494 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 XKP51811 444 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 SOX8P57073 446 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 OR4D2P58180 307 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 PSPHP78330 225 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 BTG2P78543 158 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 FOLH1Q04609 750 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 TLE3Q04726 772 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 SQLEQ14534 574 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 TGIF1Q15583 401 aa5.1□□□□□ -1.59
HMGB1P44-201ENST00000508597 CPTPQ5TA50 214 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms