RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 IQCF1Q8N6M8 205 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 CAMKVQ8NCB2 501 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 GPR26Q8NDV2 337 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 OR5H2Q8NGV7 314 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 NPLOC4Q8TAT6 608 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 GLYATL1Q969I3 302 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 ECHDC3Q96DC8 303 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 ZDHHC12Q96GR4 267 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 C3orf30Q96M34 536 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 SMOQ99835 787 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 SLC2A11Q9BYW1 496 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 SPNS1Q9H2V7 528 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 TUBG2Q9NRH3 451 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 MED17Q9NVC6 651 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 MAFFQ9ULX9 164 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 NPIPA1Q9UND3 350 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 DIMT1Q9UNQ2 313 aaKnown RBP6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 RCE1Q9Y256 329 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 CORINQ9Y5Q5 1042 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 FAM72CH0Y354 149 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 CRTAPO75718 401 aaPredicted RBP6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 SLURP2P0DP57 97 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 RAB6AP20340 208 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 TGM1P22735 817 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 APEX1P27695 318 aaKnown RBP6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 TAS2R20P59543 309 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 VGLL4Q14135 290 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 ITPRIPL2Q3MIP1 535 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 PUS10Q3MIT2 529 aaKnown RBP6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 HENMT1Q5T8I9 393 aaKnown RBP6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 FAM72AQ5TYM5 149 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 FAM72DQ6L9T8 149 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 GDPD4Q6W3E5 623 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 TMUB2Q71RG4 321 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 PRSS42Q7Z5A4 293 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 FAM72BQ86X60 149 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 GLB1L2Q8IW92 636 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 PMM1Q92871 262 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 RRNAD1Q96FB5 475 aaKnown RBP6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 SPIN2AQ99865 258 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 SPIN2BQ9BPZ2 258 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 HRH4Q9H3N8 390 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 DUS2Q9NX74 493 aaKnown RBP6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 TAC3Q9UHF0 121 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 CAMK2AQ9UQM7 478 aa6.94□□□□□ -1.3
UBE2D3-224ENST00000508474 TRDV1A0A1B0GX56 115 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 BLOC1S5-TXNDC5H3BN57 136 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 RGS13O14921 159 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 PPP1R2P9O14990 202 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 YKT6O15498 198 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 SEC14L5O43304 696 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 EGFP01133 1207 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 PIPP12273 146 aaPredicted RBP6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 MAGEB1P43366 347 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 HTRA4P83105 476 aaPredicted RBP6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 PRKCZQ05513 592 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 FPGSQ05932 587 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 ODF4Q2M2E3 257 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 TIGD5Q53EQ6 642 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 MANEALQ5VSG8 457 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 C3orf33Q6P1S2 294 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 GALNT10Q86SR1 603 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 BPHLQ86WA6 291 aaPredicted RBP6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 ZNF680Q8NEM1 530 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 SLC25A36Q96CQ1 311 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 FAM46AQ96IP4 442 aaKnown RBP6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 SAMD11Q96NU1 681 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 ZNF559Q9BR84 538 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 TTTY10Q9BZA0 68 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 PLCXD1Q9NUJ7 323 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 VNN3Q9NY84 501 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 GPR52Q9Y2T5 361 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 KPTNQ9Y664 436 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 V9GY05 133 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 KLRG2A4D1S0 409 aaPredicted RBP6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 SCDO00767 359 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 MED6O75586 246 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 MAS1P04201 325 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 EPHX1P07099 455 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 ZP3P21754 424 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 RNF144AP50876 292 aaPredicted RBP6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 PTPRCAPQ14761 206 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 CLLU1Q5K131 121 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 SLC6A19Q695T7 634 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 LPCAT3Q6P1A2 487 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 SHFQ7M4L6 423 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 CPOQ8IVL8 374 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 SLC35F2Q8IXU6 374 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 ADGRF3Q8IZF5 1079 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 OR4C15Q8NGM1 316 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 NUS1Q96E22 293 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 LMLNQ96KR4 655 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 ZNF583Q96ND8 569 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 CPPED1Q9BRF8 314 aaPredicted RBP6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 NTMT1Q9BV86 223 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 COPS7AQ9UBW8 275 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 CLEC4EQ9ULY5 219 aa6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 AK6Q9Y3D8 172 aaKnown RBP6.93□□□□□ -1.3
UBE2D3-224ENST00000508474 CIB4A0PJX0 185 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms