RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 MRPS6P82932 125 aaKnown RBP3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 TNFRSF17Q02223 184 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 CNTN2Q02246 1040 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 FGL1Q08830 312 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 PJVKQ0ZLH3 352 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 SELPLGQ14242 412 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 MTF1Q14872 753 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 SLC17A1Q14916 467 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 EMC2Q15006 297 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 FAM189A2Q15884 450 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 MAPK6Q16659 721 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 HAGHQ16775 308 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 IMMTQ16891 758 aaKnown RBP3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 LRIT3Q3SXY7 679 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 ACSF3Q4G176 576 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 DMKNQ6E0U4 476 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 EFL1Q7Z2Z2 1120 aaKnown RBP3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 DPY19L4Q7Z388 723 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 ITIH5Q86UX2 942 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 CATSPERDQ86XM0 798 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 CDH26Q8IXH8 852 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 BHLHE23Q8NDY6 225 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 OR56B2PQ8NGI1 322 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 OR6F1Q8NGZ6 308 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 OR2T3Q8NH03 318 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 NPRL2Q8WTW4 380 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 ATXN7L3BQ96GX2 97 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 ALG9Q9H6U8 611 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 TAS2R16Q9NYV7 291 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 ASB3Q9Y575 518 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 MAD1L1Q9Y6D9 718 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 PTCH1Q13635 1447 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 MBLAC1A4D2B0 266 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 GLTPD2A6NH11 291 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 CYB561D2O14569 222 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 ALOX15BO15296 676 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 ECDO95905 644 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 ADORA3P0DMS8 318 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 CD1DP15813 335 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 NCF2P19878 526 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 PTPN4P29074 926 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 CA8P35219 290 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 ZFP36L2P47974 494 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 CEBPDP49716 269 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 ERVK-16P61578 105 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 NAAAQ02083 359 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 FCHO2Q0JRZ9 810 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 CAMK4Q16566 473 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 ZSWIM7Q19AV6 140 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 AGAP7PQ5VUJ5 663 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 SEL1L3Q68CR1 1132 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 TMEM225Q6GV28 225 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 KCNIP4Q6PIL6 250 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 SYT10Q6XYQ8 523 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 GPR142Q7Z601 462 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 NET1Q7Z628 596 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 TSEN54Q7Z6J9 526 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 ACOT1Q86TX2 421 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 ZFAND4Q86XD8 727 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 FAM133AQ8N9E0 248 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 C17orf47Q8NEP4 570 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 OR52B6Q8NGF0 335 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 RAET1EQ8TD07 263 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 RNF139Q8WU17 664 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 TOMM40LQ969M1 308 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 TPD52L3Q96J77 140 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 PSKH2Q96QS6 385 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 TNFRSF13CQ96RJ3 184 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 SLC39A3Q9BRY0 314 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 NRN1Q9NPD7 142 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 AGPAT5Q9NUQ2 364 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 DUS2Q9NX74 493 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 GPR83Q9NYM4 423 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 SEC14L4Q9UDX3 406 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 LCMT1Q9UIC8 334 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 PTBP2Q9UKA9 531 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 B9D1Q9UPM9 204 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 KLHDC2Q9Y2U9 406 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 WDR45Q9Y484 360 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 MAB21L2Q9Y586 359 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 PARD3Q8TEW0 1356 aa3.36□□□□□ -1.87
TRAPPC13-209ENST00000508304 NPIPA5A0A0B4J1W7 369 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 PPIAL4CA0A0B4J2A2 164 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 RNF222A6NCQ9 220 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 A8MU76 341 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 NPIPA5E9PKD4 350 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 CXCL11O14625 94 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 TNFSF12O43508 249 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 OR1F1O43749 312 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 RANBP6O60518 1105 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 B4GALT2O60909 372 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 N4BP1O75113 896 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 SCGNO76038 276 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 POP4O95707 220 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 FHP07954 510 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 IQCF3P0C7M6 154 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 PPIAL4GP0DN37 164 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 ZNF44P15621 663 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 FCGR2CP31995 323 aa3.35□□□□□ -1.87
TRAPPC13-209ENST00000508304 SSR1P43307 286 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms