RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 U3KQ87 197 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 PLXNA4Q9HCM2 1894 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 VWA8A3KMH1 1905 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 A0A1B0GW55 424 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 NAP1L6A6NFF2 107 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 LRRN3E7EW58 273 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 FAM227AF5H4B4 570 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 NPC1O15118 1278 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 FABP7O15540 132 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 AKR7A2O43488 359 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 CHP2O43745 196 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 GREM1O60565 184 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 PLOD3O60568 738 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 UBL3O95164 117 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 CELF2O95319 508 aaKnown RBP4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 RECKO95980 971 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 AGR2O95994 175 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 SOD2P04179 222 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 TP53P04637 393 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 CKMP06732 381 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 DUX4L2P0CJ85 424 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 DUX4L3P0CJ86 424 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 DUX4L4P0CJ87 422 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 DUX4L5P0CJ88 424 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 DUX4L6P0CJ89 424 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 DUX4L7P0CJ90 424 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 LIMS3P0CW19 117 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 LIMS4P0CW20 117 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 UBL4AP11441 157 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 UGT2B7P16662 529 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 CELP19835 753 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 PAICSP22234 425 aaKnown RBP4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 AHCYP23526 432 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 FPR3P25089 353 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 SSTR4P31391 388 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 CD70P32970 193 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 PTGS2P35354 604 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 BUD31P41223 144 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 AVPR1BP47901 424 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 PREPP48147 710 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 CCR8P51685 355 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 GAS1P54826 345 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 CASP9P55211 416 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 TAS2R41P59536 307 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 AP3S2P59780 193 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 MC1RQ01726 317 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 SREBF2Q12772 1141 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMEM115Q12893 351 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 RPA4Q13156 261 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 SNTA1Q13424 505 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 PIN1Q13526 163 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 DYRK1AQ13627 763 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 RAB33AQ14088 237 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 CCDC85BQ15834 202 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 GRK1Q15835 563 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 NTRK2Q16620 822 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 DECR1Q16698 335 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 MPEG1Q2M385 716 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 CYP27C1Q4G0S4 372 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 CDONQ4KMG0 1287 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMEM35AQ53FP2 167 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 PLA1AQ53H76 456 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 ARHGAP15Q53QZ3 475 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 TOR2AQ5JU69 321 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 IDNKQ5T6J7 187 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 FAM69AQ5T7M9 428 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR2G6Q5TZ20 316 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 LAMTOR1Q6IAA8 161 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 PAQR6Q6TCH4 344 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF322Q6U7Q0 402 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 UTS2BQ765I0 119 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF765Q7L2R6 523 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 CXXC5Q7LFL8 322 aaKnown RBP4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 HSD11B1LQ7Z5J1 315 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZER1Q7Z7L7 766 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 ADGRD2Q7Z7M1 963 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 OAFQ86UD1 273 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 C17orf64Q86WR6 236 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR8H3Q8N146 312 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 UBE2J2Q8N2K1 259 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 IQCF1Q8N6M8 205 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 ARL14EPQ8N8R7 260 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 TEX19Q8NA77 164 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 MORN4Q8NDC4 146 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF680Q8NEM1 530 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR2T33Q8NG76 320 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR52L1Q8NGH7 329 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR8K5Q8NH50 307 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR56B4Q8NH76 319 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 C15orf40Q8WUR7 153 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 FGF11Q92914 225 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 WBP2Q969T9 261 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 NXPE2Q96DL1 559 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 MRPL48Q96GC5 212 aaKnown RBP4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 SCMH1Q96GD3 660 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 MAP6Q96JE9 813 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 LINC00615Q96LM1 132 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 SECISBP2Q96T21 854 aaKnown RBP4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 TM9SF2Q99805 663 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 TREX2Q9BQ50 279 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms