RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 VPS36Q86VN1 386 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 CDC20BQ86Y33 519 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 UNC5CLQ8IV45 518 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 SPEM1Q8N4L4 309 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 CCDC110Q8TBZ0 833 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 AGAP11Q8TF27 550 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 GTSF1Q8WW33 167 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 ANKRD9Q96BM1 317 aaPredicted RBP2.63□□□□□ -1.99
LSM6-205ENST00000507449 ZBED6CLQ96FA7 236 aaPredicted RBP2.63□□□□□ -1.99
LSM6-205ENST00000507449 C16orf45Q96MC5 204 aaPredicted RBP2.63□□□□□ -1.99
LSM6-205ENST00000507449 C9orf85Q96MD7 179 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 TSGA13Q96PP4 275 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 TMEM121Q9BTD3 319 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 FICDQ9BVA6 458 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 TM2D1Q9BX74 207 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 DPH5Q9H2P9 285 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 RWDD1Q9H446 243 aaPredicted RBP2.63□□□□□ -1.99
LSM6-205ENST00000507449 RBM28Q9NW13 759 aaKnown RBP2.63□□□□□ -1.99
LSM6-205ENST00000507449 C1orf123Q9NWV4 160 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 UTP6Q9NYH9 597 aaKnown RBP2.63□□□□□ -1.99
LSM6-205ENST00000507449 DUSP12Q9UNI6 340 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 NTNG1Q9Y2I2 539 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 MFHAS1Q9Y4C4 1052 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 FRG2CA6NGY1 282 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 ZSCAN5BA6NJL1 495 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 CLDN3O15551 220 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 MBD3O95983 291 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 KRT6BP04259 564 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 CT45A10P0DMU9 189 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 UMPSP11172 480 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 IL2RGP31785 369 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 HPDP32754 393 aaPredicted RBP2.62□□□□□ -1.99
LSM6-205ENST00000507449 RPL4P36578 427 aaKnown RBP2.62□□□□□ -1.99
LSM6-205ENST00000507449 KRT6CP48668 564 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 SLC10A1Q14973 349 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 TGIF1Q15583 401 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 MICAQ29983 383 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 RNLSQ5VYX0 342 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 SULT1C3Q6IMI6 304 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 ZNF774Q6NX45 483 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 CBLN3Q6UW01 205 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 STAC2Q6ZMT1 411 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 GCNT7Q6ZNI0 430 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 CYS1Q717R9 158 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 PARGQ86W56 976 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 ZNF573Q86YE8 665 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 HPS6Q86YV9 775 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 HSCBQ8IWL3 235 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 GIPC3Q8TF64 312 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 UPRTQ96BW1 309 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 DHTKD1Q96HY7 919 aaPredicted RBP2.62□□□□□ -1.99
LSM6-205ENST00000507449 CASD1Q96PB1 797 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 APOL2Q9BQE5 337 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 TBCDQ9BTW9 1192 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 HCAR1Q9BXC0 346 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 SLC25A51Q9H1U9 297 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 LPAR2Q9HBW0 351 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 TIGARQ9NQ88 270 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 IMPAD1Q9NX62 359 aa2.62□□□□□ -1.99
LSM6-205ENST00000507449 BARX2Q9UMQ3 279 aaPredicted RBP2.62□□□□□ -1.99
LSM6-205ENST00000507449 CCDC7Q96M83 1385 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 IGKV3D-20A0A0C4DH25 116 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 TRBV7-9A0A0J9YWB2 115 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 SLC17A2O00624 439 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 CASKO14936 926 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 PPIHO43447 177 aaKnown RBP2.61□□□□□ -1.99
LSM6-205ENST00000507449 LATO43561 262 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 RAMP1O60894 148 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 RHBDL1O75783 438 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 GJB5O95377 273 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 SLC2A10O95528 541 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 GUCA1CO95843 209 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 HEXBP07686 556 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 IGFBP1P08833 259 aaPredicted RBP2.61□□□□□ -1.99
LSM6-205ENST00000507449 GIG44P09565 113 aaPredicted RBP2.61□□□□□ -1.99
LSM6-205ENST00000507449 THRBP10828 461 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 AXLP30530 894 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 DLSTP36957 453 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 PTGER3P43115 390 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 TAF6P49848 677 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 METAP1P53582 386 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 CXCL6P80162 114 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 IL9RQ01113 521 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 PLOD1Q02809 727 aaPredicted RBP2.61□□□□□ -1.99
LSM6-205ENST00000507449 KLHL30Q0D2K2 578 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 IL18R1Q13478 541 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 DPYSL3Q14195 570 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 CHI3L2Q15782 390 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 Q1RN00 199 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 DCAF4L1Q3SXM0 396 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 TIMM50Q3ZCQ8 353 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 CYBRD1Q53TN4 286 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 TMEM41BQ5BJD5 291 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 FAM120AOSQ5T036 256 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 LGSNQ5TDP6 509 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 SLX4IPQ5VYV7 408 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 ZNF57Q68EA5 555 aaPredicted RBP2.61□□□□□ -1.99
LSM6-205ENST00000507449 CGB2Q6NT52 195 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 AFTPHQ6ULP2 937 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 SERINC5Q86VE9 423 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms