RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 FBXO25Q8TCJ0 367 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 PNPLA2Q96AD5 504 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 TMEM186Q96B77 213 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 ATF6BQ99941 703 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 CCDC28BQ9BUN5 200 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 OCR1Q9BZK8 76 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 CTNNA3Q9UI47 895 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 MGAT4AQ9UM21 535 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 SLC6A5Q9Y345 797 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 FBXO7Q9Y3I1 522 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 MUC6Q6W4X9 2439 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 ALPK3Q96L96 1907 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 SPEF2Q9C093 1822 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 KRTAP16-1A8MUX0 517 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 CGAP01215 116 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 CXCL10P02778 98 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 ACP1P24666 158 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 MAPK3P27361 379 aaPredicted RBP4.81□□□□□ -1.64
HERC4-213ENST00000506515 AKT2P31751 481 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 ZNF131P52739 623 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 ATXN3P54252 364 aaPredicted RBP4.81□□□□□ -1.64
HERC4-213ENST00000506515 EMC2Q15006 297 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 CLPPQ16740 277 aaPredicted RBP4.81□□□□□ -1.64
HERC4-213ENST00000506515 POM121L1PQ3SYA9 428 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 TCHHL1Q5QJ38 904 aaPredicted RBP4.81□□□□□ -1.64
HERC4-213ENST00000506515 ZNF343Q6P1L6 599 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 NEK5Q6P3R8 708 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 METTL7BQ6UX53 244 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 GPRIN3Q6ZVF9 776 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 ADGRD2Q7Z7M1 963 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 SLC22A16Q86VW1 577 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 ABHD12Q8N2K0 398 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 LRRC17Q8N6Y2 441 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 ZNF781Q8N8C0 355 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 OR4F5Q8NH21 305 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 P3H4Q92791 437 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 TMEM45BQ96B21 275 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 C12orf42Q96LP6 360 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 RBM4BQ9BQ04 359 aaKnown RBP4.81□□□□□ -1.64
HERC4-213ENST00000506515 DCTPP1Q9H773 170 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 PLA2G4CQ9UP65 541 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 CDH23Q9H251 3354 aa4.81□□□□□ -1.64
HERC4-213ENST00000506515 A0A1B0GUL7 405 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 K7ERI5 159 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 TSPAN2O60636 221 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 STAM2O75886 525 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 HPRP00739 348 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 UQCRFS1P1P0C7P4 283 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 PRDX6P30041 224 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 TRIM23P36406 574 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 ETV5P41161 510 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 SLC1A4P43007 532 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 BTDP43251 543 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 VEGFCP49767 419 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 FCHO2Q0JRZ9 810 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 RAPSNQ13702 412 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 GAMTQ14353 236 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 SNAI3Q3KNW1 292 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 GLIPR1L2Q4G1C9 344 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 UNC50Q53HI1 259 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 YRDCQ86U90 279 aaKnown RBP4.8□□□□□ -1.64
HERC4-213ENST00000506515 ZSCAN30Q86W11 494 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 CCDC71Q8IV32 467 aaPredicted RBP4.8□□□□□ -1.64
HERC4-213ENST00000506515 ELMOD2Q8IZ81 293 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 KDM8Q8N371 416 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 HDDC3Q8N4P3 179 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 SAMD12Q8N8I0 201 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 PHYHIPQ92561 330 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 FAM111AQ96PZ2 611 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 CBWD1Q9BRT8 395 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 FTHL17Q9BXU8 183 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 KRT23Q9C075 422 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 LRRCC1Q9C099 1032 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 NACA2Q9H009 215 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 C1orf21Q9H246 121 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 HEXA-AS1Q9H8Q6 139 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 JPT2Q9H910 190 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 TAS2R16Q9NYV7 291 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 GTSE1Q9NYZ3 720 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 CLIP2Q9UDT6 1046 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 HOOK1Q9UJC3 728 aaKnown RBP4.8□□□□□ -1.64
HERC4-213ENST00000506515 RARRES3Q9UL19 164 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.8□□□□□ -1.64
HERC4-213ENST00000506515 PIN4Q9Y237 131 aaKnown RBP4.8□□□□□ -1.64
HERC4-213ENST00000506515 COL4A1P02462 1669 aa4.8□□□□□ -1.64
HERC4-213ENST00000506515 MROH7-TTC4A0A0A0MT08 1334 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 FANCIQ9NVI1 1328 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 TEX48A0A1B0GUV7 120 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 PRPSAP2O60256 369 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 TGFAP01135 160 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 IGHG1P01857 330 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 ZCCHC18P0CG32 403 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 CYBAP13498 195 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 CALML3P27482 149 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 RFC2P35250 354 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 NPY2RP49146 381 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 KRTAP10-9P60411 292 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 ACY1Q03154 408 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 NME3Q13232 169 aa4.79□□□□□ -1.64
HERC4-213ENST00000506515 CCL14Q16627 93 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms