RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 OR2M3Q8NG83 312 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 LINC01560Q8TB33 94 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 DUSP19Q8WTR2 217 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 WNT2BQ93097 391 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 CIDECQ96AQ7 238 aaPredicted RBP13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 TRIM44Q96DX7 344 aaPredicted RBP13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 METTL2AQ96IZ6 378 aaKnown RBP13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 GPATCH1Q9BRR8 931 aaKnown RBP13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 LMF2Q9BU23 707 aaKnown RBP13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 RASSF1Q9NS23 344 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 C1orf109Q9NX04 203 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 SENP1Q9P0U3 644 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 CBLCQ9ULV8 474 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 DNAJC15Q9Y5T4 150 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 EXPH5Q8NEV8 1989 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 ANKHD1Q8IWZ3 2542 aaKnown RBP13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 H0Y3Z8 333 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 RGS14O43566 566 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 AKAP10O43572 662 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 SCO2O43819 266 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 COQ9O75208 318 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 IL33O95760 270 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 TGM6O95932 706 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 CHRNGP07510 517 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 FGF4P08620 206 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 SDC1P18827 310 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 CHMP24386 653 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 GABRA3P34903 492 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 EVI2BP34910 448 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 OPRM1P35372 400 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 DGKQP52824 942 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 IST1P53990 364 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 PSPHP78330 225 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 RCAN2Q14206 197 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 DAZAP2Q15038 168 aaPredicted RBP13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 BCL2A1Q16548 175 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 IKBIPQ70UQ0 350 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 MARCH3Q86UD3 253 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 TRABD2AQ86V40 505 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 IFNEQ86WN2 208 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 FAM222BQ8WU58 562 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 HOXB13Q92826 284 aaPredicted RBP13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 INTS12Q96CB8 462 aaKnown RBP13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 SFXN2Q96NB2 322 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 DDX18Q9NVP1 670 aaKnown RBP13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 SLC17A7Q9P2U7 560 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 CLCF1Q9UBD9 225 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 FIS1Q9Y3D6 152 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 ARHGAP21Q5T5U3 1957 aa13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 HRNRQ86YZ3 2850 aaPredicted RBP13.03□□□□□ -0.32
CDC42SE2-209ENST00000506419 MTORP42345 2549 aa13.02□□□□□ -0.32
CDC42SE2-209ENST00000506419 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 A6NNC1 897 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 TMEM233B4DJY2 109 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 H0YC42 278 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 TBX19O60806 448 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 SPAG7O75391 227 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 SLITRK5O94991 958 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 CREB1P16220 341 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 ZNF708P17019 499 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 NTSP30990 170 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 ARRB2P32121 409 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 GCKP35557 465 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 SUCLG1P53597 346 aaKnown RBP13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 TPD52P55327 224 aaPredicted RBP13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 DSCR4P56555 118 aaPredicted RBP13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 VSNL1P62760 191 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 MRPS22P82650 360 aaKnown RBP13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 FLYWCH1Q4VC44 716 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 ARL13AQ5H913 290 aaPredicted RBP13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 KANK2Q63ZY3 851 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 AAGABQ6PD74 315 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 RNF165Q6ZSG1 346 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 EXOC3L1Q86VI1 746 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 OR4K17Q8NGC6 315 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 OR5M1Q8NGP8 315 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 CLHC1Q8NHS4 586 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 NUDT8Q8WV74 236 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 PIK3R3Q92569 461 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 GIMAP5Q96F15 307 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 TSSK3Q96PN8 268 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 MECRQ9BV79 373 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 POLDIP3Q9BY77 421 aaKnown RBP13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 REEP4Q9H6H4 257 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 MKS1Q9NXB0 559 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 PPP4R1LQ9P1A2 415 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 GIMAP2Q9UG22 337 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 FOXD3Q9UJU5 478 aaPredicted RBP13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 DKKL1Q9UK85 242 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 ZNF337Q9Y3M9 751 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 TRAF6Q9Y4K3 522 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 PRRC2AP48634 2157 aaKnown RBP13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 SETD2Q9BYW2 2564 aaPredicted RBP13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 ITPR3Q14573 2671 aa13.02□□□□□ -0.33
CDC42SE2-209ENST00000506419 MPDZO75970 2070 aa13.01□□□□□ -0.33
CDC42SE2-209ENST00000506419 EEF1E1-BLOC1S5C9J1V9 151 aa13.01□□□□□ -0.33
CDC42SE2-209ENST00000506419 LSM1O15116 133 aaKnown RBP13.01□□□□□ -0.33
CDC42SE2-209ENST00000506419 EEF1E1O43324 174 aaKnown RBP13.01□□□□□ -0.33
CDC42SE2-209ENST00000506419 HCRTR2O43614 444 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms