RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 WIF1Q9Y5W5 379 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 GPR45Q9Y5Y3 372 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 EML6Q6ZMW3 1958 aa15.27■□□□□ 0.03
SNCA-209ENST00000506244 TRGV5A0A0B4J1U4 118 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 AQP7O14520 342 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 ZNF195O14628 629 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 BCKDKO14874 412 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 ICOSLGO75144 302 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 PDE9AO76083 593 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 ACP2P11117 423 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 CYP4B1P13584 511 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 LCN1P31025 176 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 GCKP35557 465 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 MAP3K8P41279 467 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 RFX3P48380 749 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 STX1BP61266 288 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 LASP1Q14847 261 aaKnown RBP15.26■□□□□ 0.03
SNCA-209ENST00000506244 TIGD3Q6B0B8 471 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 CDC73Q6P1J9 531 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 EPGNQ6UW88 154 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 TRILQ7L0X0 811 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 FJX1Q86VR8 437 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 TRIML2Q8N7C3 387 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 FBXO30Q8TB52 745 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 SARAFQ96BY9 339 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 G6PC3Q9BUM1 346 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 ACTRT3Q9BYD9 372 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 GALNT9Q9HCQ5 603 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 SDHAF3Q9NRP4 125 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 SH3BGRL2Q9UJC5 107 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 TINAGQ9UJW2 476 aa15.26■□□□□ 0.03
SNCA-209ENST00000506244 USP9XQ93008 2570 aaPredicted RBP15.25■□□□□ 0.03
SNCA-209ENST00000506244 RNF103-CHMP3A0A140T963 221 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 A0A1B0GVC2 190 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 CCL21O00585 134 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 SLC22A3O75751 556 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 WISP2O76076 250 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 LDLRP01130 860 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 TPOP07202 933 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 RFPL3SP0C7P2 107 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 ESRRAP11474 423 aaPredicted RBP15.25■□□□□ 0.03
SNCA-209ENST00000506244 PTGDSP41222 190 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 NME5P56597 212 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 WNT3P56703 355 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 UFM1P61960 85 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 IRX1P78414 480 aaPredicted RBP15.25■□□□□ 0.03
SNCA-209ENST00000506244 POU6F2P78424 691 aaPredicted RBP15.25■□□□□ 0.03
SNCA-209ENST00000506244 C3AR1Q16581 482 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 DUSP5Q16690 384 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.25■□□□□ 0.03
SNCA-209ENST00000506244 CD163Q86VB7 1156 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 CHERPQ8IWX8 916 aaKnown RBP15.25■□□□□ 0.03
SNCA-209ENST00000506244 CLECL1Q8IZS7 167 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 MIER2Q8N344 545 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 SLC16A11Q8NCK7 471 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 OR5AK3PQ8NH89 298 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 ADAMTS15Q8TE58 950 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 NUDT8Q8WV74 236 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 RNF138Q8WVD3 245 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 STON2Q8WXE9 905 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 PIK3R3Q92569 461 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 NTNG2Q96CW9 530 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 OR52B2Q96RD2 323 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 SIKE1Q9BRV8 207 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 CCDC28BQ9BUN5 200 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 BTBD2Q9BX70 525 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 UBQLN3Q9H347 655 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 TP63Q9H3D4 680 aaPredicted RBP15.25■□□□□ 0.03
SNCA-209ENST00000506244 PIGUQ9H490 435 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 SDR39U1Q9NRG7 319 aaPredicted RBP15.25■□□□□ 0.03
SNCA-209ENST00000506244 BTNL2Q9UIR0 455 aa15.25■□□□□ 0.03
SNCA-209ENST00000506244 GXYLT2A0PJZ3 443 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 DUXAA6NLW8 204 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 FIGNL2A6NMB9 653 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 GNB5O14775 395 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 ATP8B1O43520 1251 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 CBR3O75828 277 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 ZIC2O95409 532 aaPredicted RBP15.24■□□□□ 0.03
SNCA-209ENST00000506244 IL6P05231 212 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 HPNP05981 417 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 PGRP06401 933 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 CELA3AP09093 270 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 UQCRC2P22695 453 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 PTPN6P29350 595 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 TOMM20Q15388 145 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 EXOSC6Q5RKV6 272 aaKnown RBP15.24■□□□□ 0.03
SNCA-209ENST00000506244 FNDC7Q5VTL7 733 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 DESI1Q6ICB0 168 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 RPTNQ6XPR3 784 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 FGD2Q7Z6J4 655 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 ANKRD46Q86W74 232 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 PLCZ1Q86YW0 608 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 NEIL3Q8TAT5 605 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 SLC35G5Q96KT7 338 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 MARK4Q96L34 752 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 CCDC115Q96NT0 180 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 GNRHR2Q96P88 292 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 TBL1XR1Q9BZK7 514 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 GPATCH2Q9NW75 528 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 PPP4R1LQ9P1A2 415 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms