RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 POC1B-GALNT4F8VUJ3 575 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 MANBAO00462 879 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 OR4F21O95013 312 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 TGM6O95932 706 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 ENO1P06733 434 aaKnown RBP19■□□□□ 0.63
SQSTM1-210ENST00000506042 SNRPAP09012 282 aaKnown RBP19■□□□□ 0.63
SQSTM1-210ENST00000506042 TCEA1P23193 301 aaKnown RBP19■□□□□ 0.63
SQSTM1-210ENST00000506042 MAGEA12P43365 314 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 NR1H2P55055 460 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 CDH13P55290 713 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 CTBP2P56545 445 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 NAA20P61599 178 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 SIRPAP78324 504 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 FAM27E3Q08E93 113 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 SH2D4BQ5SQS7 431 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 DESI1Q6ICB0 168 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 PLEKHM3Q6ZWE6 761 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 UHMK1Q8TAS1 419 aaKnown RBP19■□□□□ 0.63
SQSTM1-210ENST00000506042 TMEM171Q8WVE6 324 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 KAT2AQ92830 837 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 EFHD2Q96C19 240 aaPredicted RBP19■□□□□ 0.63
SQSTM1-210ENST00000506042 STARD4Q96DR4 205 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 ZNF382Q96SR6 550 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 TBL1XR1Q9BZK7 514 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 DSN1Q9H410 356 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 FAM120CQ9NX05 1096 aaKnown RBP19■□□□□ 0.63
SQSTM1-210ENST00000506042 NINJ2Q9NZG7 142 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 WBP11Q9Y2W2 641 aaKnown RBP19■□□□□ 0.63
SQSTM1-210ENST00000506042 AP4B1Q9Y6B7 739 aa19■□□□□ 0.63
SQSTM1-210ENST00000506042 A0A087WUV0 522 aaPredicted RBP18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 A0A087WV62 115 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 A8MT66 165 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 H3BQF6 201 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 H7C1Q1 480 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 SEC14L5O43304 696 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 TBXA2RP21731 343 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 TIA1P31483 386 aaKnown RBP eCLIP18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 HSD17B3P37058 310 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 PKNOX1P55347 436 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 CORO7P57737 925 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 ETF1P62495 437 aaKnown RBP18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 C17orf67Q0P5P2 114 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 IMPG1Q17R60 797 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 BEX5Q5H9J7 111 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 ZNF572Q7Z3I7 529 aaPredicted RBP18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 MMGT1Q8N4V1 131 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 LRRN4CLQ8ND94 238 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 SMR3AQ99954 134 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 G6PC3Q9BUM1 346 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 FUT8Q9BYC5 575 aa18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 DDX18Q9NVP1 670 aaKnown RBP18.99■□□□□ 0.63
SQSTM1-210ENST00000506042 ESYT3A0FGR9 886 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 TRIM49D1C9J1S8 452 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 H3BML4 177 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 ZIC3O60481 467 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 KCNH1O95259 989 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 ANXA4P09525 319 aaPredicted RBP18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 ZNF763Q0D2J5 394 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 VPS26BQ4G0F5 336 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 SPDYAQ5MJ70 313 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 PDSS1Q5T2R2 415 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 GTF2IRD2BQ6EKJ0 949 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 PPP4R4Q6NUP7 873 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 VWA1Q6PCB0 445 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 FAM214BQ7L5A3 538 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 GTF2IRD2Q86UP8 949 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 CCDC126Q96EE4 140 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 PERPQ96FX8 193 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 HBEGFQ99075 208 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 FMO2Q99518 471 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 KLHL4Q9C0H6 718 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 RNF122Q9H9V4 155 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 GLRX2Q9NS18 164 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 MCTS1Q9ULC4 181 aaKnown RBP18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 ACANP16112 2415 aa18.98■□□□□ 0.63
SQSTM1-210ENST00000506042 MED12LQ86YW9 2145 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 A0A1B0GTL3 188 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 SYNGR4O95473 234 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 LY6G6DO95868 133 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 NCBP2P52298 156 aaKnown RBP eCLIP18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 SLC7A5Q01650 507 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 STX5Q13190 355 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 PON3Q15166 354 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 FAM180BQ6P0A1 224 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 BTLAQ7Z6A9 289 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 HOMEZQ8IX15 550 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 FADS6Q8N9I5 356 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 OR2M3Q8NG83 312 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 CDC26Q8NHZ8 85 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 C16orf78Q8WTQ4 265 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 ARSGQ96EG1 525 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 ZC3HAV1LQ96H79 300 aaKnown RBP18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 GSX2Q9BZM3 304 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 OPN3Q9H1Y3 402 aaPredicted RBP18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 CDC42EP4Q9H3Q1 356 aaKnown RBP18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 ZDHHC18Q9NUE0 388 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 HEY2Q9UBP5 337 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 SNX8Q9Y5X2 465 aa18.97■□□□□ 0.63
SQSTM1-210ENST00000506042 MAP1AP78559 2803 aaPredicted RBP18.96■□□□□ 0.63
SQSTM1-210ENST00000506042 EXOC1LA0A1B0GW35 172 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms