RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 RIT1Q92963 219 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 ZNF501Q96CX3 271 aaPredicted RBP7.5□□□□□ -1.21
COL4A5-208ENST00000505728 OTUB1Q96FW1 271 aaPredicted RBP7.5□□□□□ -1.21
COL4A5-208ENST00000505728 PRRC1Q96M27 445 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 ALPK1Q96QP1 1244 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 FEVQ99581 238 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 PITX2Q99697 317 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 APOL4Q9BPW4 351 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 NUDT22Q9BRQ3 303 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 FNDC11Q9BVV2 318 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 GABARAPL3Q9BY60 117 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 ING2Q9H160 280 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 RIBC2Q9H4K1 309 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 SOX17Q9H6I2 414 aaPredicted RBP7.5□□□□□ -1.21
COL4A5-208ENST00000505728 ARMC7Q9H6L4 198 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 NMNAT1Q9HAN9 279 aaPredicted RBP7.5□□□□□ -1.21
COL4A5-208ENST00000505728 ZNF304Q9HCX3 659 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 PAPOLBQ9NRJ5 636 aaKnown RBP7.5□□□□□ -1.21
COL4A5-208ENST00000505728 NDOR1Q9UHB4 597 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 NDRG4Q9ULP0 352 aaKnown RBP7.5□□□□□ -1.21
COL4A5-208ENST00000505728 SRPK3Q9UPE1 567 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 MGAT4BQ9UQ53 548 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 TMEM184BQ9Y519 407 aaPredicted RBP7.5□□□□□ -1.21
COL4A5-208ENST00000505728 CLDN16Q9Y5I7 305 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 GMPPBQ9Y5P6 360 aa7.5□□□□□ -1.21
COL4A5-208ENST00000505728 CACNA1GO43497 2377 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 FREM2Q5SZK8 3169 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 FER1L5A0AVI2 2057 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 SMIM31A0A1B0GVY4 71 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 A0A1B0GX78 115 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 A0A1W2PQM1 296 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 A0A1W2PRQ8 180 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 AGAP5A6NIR3 686 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 TGFBR3LH3BV60 316 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 FOXD2O60548 495 aaPredicted RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 FCMRO60667 390 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 SEC24DO94855 1032 aaPredicted RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 EPPINO95925 133 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 TFAP2AP05549 437 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 DBIP07108 87 aaKnown RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 CKMT1AP12532 417 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 TNNI3P19429 210 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 RPS4Y1P22090 263 aaKnown RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 ALAS2P22557 587 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 CBLP22681 906 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 GABRA3P34903 492 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 PIGAP37287 484 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 CLK3P49761 638 aaKnown RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 EMDP50402 254 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 HLCSP50747 726 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 NUP107P57740 925 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 CXCR4P61073 352 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 ISL1P61371 349 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 ESRRGP62508 458 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 CSNK2BP67870 215 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 RPP38P78345 283 aaKnown RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 IL1RL1Q01638 556 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 CD47Q08722 323 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 ZNF155Q12901 538 aaPredicted RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 DSG2Q14126 1118 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 DGCR6Q14129 220 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 ERV3-1Q14264 604 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 ZNF267Q14586 743 aaPredicted RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 GANABQ14697 944 aaKnown RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 LAPTM4AQ15012 233 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 EXOSC7Q15024 291 aaKnown RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 ZSWIM7Q19AV6 140 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 PROX2Q3B8N5 592 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 LIN52Q52LA3 116 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 TRIM61Q5EBN2 209 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 C6orf141Q5SZD1 244 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 MLIPQ5VWP3 458 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 ZNF574Q6ZN55 896 aaPredicted RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 DGAT2L6Q6ZPD8 337 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 QSOX2Q6ZRP7 698 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 OLIG3Q7RTU3 272 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 WDR53Q7Z5U6 358 aaPredicted RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 GALNT5Q7Z7M9 940 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 TSPYL5Q86VY4 417 aaPredicted RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 BPHLQ86WA6 291 aaPredicted RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 VRK2Q86Y07 508 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 OFCC1Q8IZS5 231 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 SHISA5Q8N114 240 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 PARP8Q8N3A8 854 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 EID2Q8N6I1 236 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 TOR1AIP2Q8NFQ8 470 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 OR52J3Q8NH60 311 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 VANGL1Q8TAA9 524 aaPredicted RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 ZG16BQ96DA0 208 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 HRASLS5Q96KN8 279 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 CNDP2Q96KP4 475 aaKnown RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 PTCHD1Q96NR3 888 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 FUZQ9BT04 418 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 YIPF2Q9BWQ6 316 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 POLR2J2Q9GZM3 115 aaKnown RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 ZNF350Q9GZX5 532 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 POLR2J3Q9H1A7 115 aaKnown RBP7.49□□□□□ -1.21
COL4A5-208ENST00000505728 ANKRD19PQ9H560 264 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 FOLH1BQ9HBA9 442 aa7.49□□□□□ -1.21
COL4A5-208ENST00000505728 NECTIN3Q9NQS3 549 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms