RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 RAD51AP1Q96B01 352 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 CREB3L1Q96BA8 519 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 MS4A3Q96HJ5 214 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 HDHD2Q9H0R4 259 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 ZFP64Q9NPA5 681 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 SLC35C2Q9NQQ7 365 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 IMP3Q9NV31 184 aaKnown RBP11.13□□□□□ -0.63
UBE3D-206ENST00000505226 ZFR2Q9UPR6 939 aaKnown RBP11.13□□□□□ -0.63
UBE3D-206ENST00000505226 EXOGQ9Y2C4 368 aaKnown RBP11.13□□□□□ -0.63
UBE3D-206ENST00000505226 MYO10Q9HD67 2058 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 J3QRE1 110 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 CDC42EP2O14613 210 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 GAAP10253 952 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 STXBP1P61764 594 aaKnown RBP11.13□□□□□ -0.63
UBE3D-206ENST00000505226 MLC1Q15049 377 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 ZNF767PQ75MW2 155 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 CCDC116Q8IYX3 515 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 LINC00471Q8N535 108 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 LINC01555Q8NAE3 123 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 NUS1Q96E22 293 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 CNRIP1Q96F85 164 aaPredicted RBP11.13□□□□□ -0.63
UBE3D-206ENST00000505226 SLC38A2Q96QD8 506 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 AIF1LQ9BQI0 150 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 THAP7Q9BT49 309 aaPredicted RBP11.13□□□□□ -0.63
UBE3D-206ENST00000505226 TRAF4Q9BUZ4 470 aaPredicted RBP11.13□□□□□ -0.63
UBE3D-206ENST00000505226 ATP13A2Q9NQ11 1180 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 WASH6PQ9NQA3 447 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 HINT3Q9NQE9 182 aaKnown RBP11.13□□□□□ -0.63
UBE3D-206ENST00000505226 TAS2R7Q9NYW3 318 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 TRAV6A0A075B6T7 132 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 C17orf113A0A1B0GUU1 675 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 NOS1APO75052 506 aaPredicted RBP11.13□□□□□ -0.63
UBE3D-206ENST00000505226 ERAL1O75616 437 aaKnown RBP11.13□□□□□ -0.63
UBE3D-206ENST00000505226 ERGP11308 486 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 C6P13671 934 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 HK1P19367 917 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 PTBP1P26599 531 aaKnown RBP eCLIP11.13□□□□□ -0.63
UBE3D-206ENST00000505226 SHC1P29353 583 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 PPP2R1BP30154 601 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 INPP1P49441 399 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 ACSM1Q08AH1 577 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 ADAM15Q13444 863 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 OR4C11Q6IEV9 310 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 ANKRD54Q6NXT1 300 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 LILRA6Q6PI73 481 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 SMARCD3Q6STE5 483 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 TMEM107Q6UX40 140 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 KLHL36Q8N4N3 616 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 BBS10Q8TAM1 723 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 CD99L2Q8TCZ2 262 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 ARRDC3Q96B67 414 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 RGMAQ96B86 450 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 ABHD1Q96SE0 405 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 SLC38A1Q9H2H9 487 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 MED20Q9H944 212 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 PAK6Q9NQU5 681 aaPredicted RBP11.13□□□□□ -0.63
UBE3D-206ENST00000505226 CYSLTR2Q9NS75 346 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 NOTCH4Q99466 2003 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 IRGMA1A4Y4 181 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 MAN2B1O00754 1011 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 FUT1P19526 365 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 CXCL3P19876 107 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 KELP23276 732 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 PKLRP30613 574 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 IFNA8P32881 189 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 DEFB103AP81534 67 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 REEP5Q00765 189 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 ESCO2Q56NI9 601 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 C6orf132Q5T0Z8 1188 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 GPR135Q8IZ08 494 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 SIX5Q8N196 739 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 NATD1Q8N6N6 113 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 C7orf57Q8NEG2 295 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 TMEM255BQ8WV15 326 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 ZSWIM3Q96MP5 696 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 TBX5Q99593 518 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 ENKD1Q9H0I2 346 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.12□□□□□ -0.63
UBE3D-206ENST00000505226 NARFLQ9H6Q4 476 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 SYNPO2LQ9H987 977 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 POLHQ9Y253 713 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 ANTXRLA6NF34 631 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 SNTNA6NMZ2 147 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 E9PI62 339 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 RNF13O43567 381 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 FCMRO60667 390 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 AHRP35869 848 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 CCR8P51685 355 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 TAS2R38P59533 333 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 ZNF311Q5JNZ3 666 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 ZBTB37Q5TC79 503 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 MZT2AQ6P582 158 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 C12orf40Q86WS4 652 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 CPOQ8IVL8 374 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 CCDC28AQ8IWP9 274 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 NRMQ8IXM6 262 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 OR8H1Q8NGG4 311 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 OR51G2Q8NGK0 314 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 CHFRQ96EP1 664 aa11.12□□□□□ -0.63
UBE3D-206ENST00000505226 HYLS1Q96M11 299 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms