RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 OR51I1Q9H343 314 aa7.17□□□□□ -1.26
NEDD9-208ENST00000504387 IFT46Q9NQC8 304 aa7.17□□□□□ -1.26
NEDD9-208ENST00000504387 TAS2R7Q9NYW3 318 aa7.17□□□□□ -1.26
NEDD9-208ENST00000504387 CYB5R1Q9UHQ9 305 aa7.17□□□□□ -1.26
NEDD9-208ENST00000504387 ADAM30Q9UKF2 790 aa7.17□□□□□ -1.26
NEDD9-208ENST00000504387 LHX6Q9UPM6 363 aa7.17□□□□□ -1.26
NEDD9-208ENST00000504387 A0A1W2PRU2 124 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 NEDD8-MDP1E9PL57 170 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 H7C4K7 107 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 QSOX1O00391 747 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 CHST10O43529 356 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 FMO6PO60774 539 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 IGSF6O95976 241 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 TFP02787 698 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 SRPRAP08240 638 aaKnown RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 RRASP10301 218 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ATP1B2P14415 290 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 PITPNBP48739 271 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 TAS2R41P59536 307 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 BEX5Q5H9J7 111 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 MEDAGQ5VYS4 303 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ELP2Q6IA86 826 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 OR5M10Q6IEU7 315 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 MACC1Q6ZN28 852 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 LINGO2Q7L985 606 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 NLRC3Q7RTR2 1065 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 TRMT11Q7Z4G4 463 aaKnown RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 CPOQ8IVL8 374 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 OXR1Q8N573 874 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ZNF671Q8TAW3 534 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 BCL7CQ8WUZ0 217 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ING5Q8WYH8 240 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 CREB3L1Q96BA8 519 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 FOPNLQ96NB1 174 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 F2RL3Q96RI0 385 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 GINS4Q9BRT9 223 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 FUZQ9BT04 418 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ADAT1Q9BUB4 502 aaKnown RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 KCNN2Q9H2S1 579 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 OSGEPL1Q9H4B0 414 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 DLL4Q9NR61 685 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 RNF186Q9NXI6 227 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ZDHHC3Q9NYG2 299 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 FNIP2Q9P278 1114 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 STOX2Q9P2F5 926 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 MGAT4CQ9UBM8 478 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 LSM7Q9UK45 103 aaKnown RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 DIMT1Q9UNQ2 313 aaKnown RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 AK6Q9Y3D8 172 aaKnown RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 MEIS3P1A6NDR6 274 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 OR2W5A6NFC9 320 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 FAM74A7A6NL05 159 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 FAM170BA6NMN3 283 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 H7C0S8 307 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ARPC1BO15143 372 aaKnown RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 FZD7O75084 574 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 HLA-DPB1P04440 258 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 IFNA16P05015 189 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 GLAP06280 429 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ANXA7P20073 488 aaKnown RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 PPIBP23284 216 aaKnown RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 GABRA5P31644 462 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ACSL1P33121 698 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 BTCP35070 178 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ASMTP46597 345 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 SLC6A12P48065 614 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 TPMTP51580 245 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ERVK-25P63136 954 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 E2F1Q01094 437 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 FAM74A3Q4VXF1 159 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 PLA1AQ53H76 456 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 MED27Q6P2C8 311 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 C17orf99Q6UX52 265 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 C6orf120Q7Z4R8 191 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 CFAP206Q8IYR0 622 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ZFP82Q8N141 532 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 PPP1R16AQ96I34 528 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 TREX2Q9BQ50 279 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ARL6Q9H0F7 186 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 GHITMQ9H3K2 345 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 CA10Q9NS85 328 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 CORO2BQ9UQ03 480 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 MGAT4BQ9UQ53 548 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 RCE1Q9Y256 329 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 IRAK3Q9Y616 596 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 MYO16Q9Y6X6 1858 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 CASP8AP2Q9UKL3 1982 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 SLC22A23A1A5C7 686 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 MANSC4A6NHS7 340 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-208ENST00000504387 PDCD5O14737 125 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 PGRMC2O15173 223 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 MMP20O60882 483 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ADRB1P08588 477 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 FURINP09958 794 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ARAFP10398 606 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 CLUP10909 449 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 CYBAP13498 195 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 AHCYP23526 432 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 TRIM23P36406 574 aa7.16□□□□□ -1.26
NEDD9-208ENST00000504387 ZP1P60852 638 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms