RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 SIM1P81133 766 aaPredicted RBP15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 FGL1Q08830 312 aa15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 PIN1Q13526 163 aaPredicted RBP15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 ZMYND11Q15326 602 aa15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 ZDHHC1Q8WTX9 485 aa15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 MR1Q95460 341 aa15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 MSANTD3Q96H12 275 aa15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 CITO14578 2027 aa15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 AGAP5A6NIR3 686 aa15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 RNF144AP50876 292 aaPredicted RBP15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 RIDAP52758 137 aaKnown RBP15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 CAPZA1P52907 286 aa15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 DDX60LQ5H9U9 1706 aaKnown RBP15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 TMEM173Q86WV6 379 aaPredicted RBP15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 OR5AR1Q8NGP9 310 aa15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 ARL6Q9H0F7 186 aa15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 CXCL16Q9H2A7 254 aa15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 SYT4Q9H2B2 425 aa15.29■□□□□ 0.04
HMGXB3-202ENST00000503427 KRBA1A5PL33 1030 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 CASC3O15234 703 aaKnown RBP15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 F11P03951 625 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 CDK1P06493 297 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 ALDOCP09972 364 aaKnown RBP15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 GBX1Q14549 363 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 NNATQ16517 81 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 LRRC37A5PQ49AS3 106 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 OR4N5Q8IXE1 308 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 ASB15Q8WXK1 588 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 CIDECQ96AQ7 238 aaPredicted RBP15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 KIAA1143Q96AT1 154 aaPredicted RBP15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 ZFYVE21Q9BQ24 234 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 ZBTB20Q9HC78 741 aaPredicted RBP15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 B4GAT1O43505 415 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 EMX1Q04741 257 aaPredicted RBP15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 ZNF691Q5VV52 312 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 GPAT4Q86UL3 456 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 UBXN10Q96LJ8 280 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 PINK1Q9BXM7 581 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 ZNF717Q9BY31 904 aaPredicted RBP15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 TPSD1Q9BZJ3 242 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 KATNBL1Q9H079 304 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 ZBP1Q9H171 429 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 CNOT2Q9NZN8 540 aaKnown RBP15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 DKKL1Q9UK85 242 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 MAGEA3P43357 314 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 TBC1D25Q3MII6 688 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 CHRFAM7AQ494W8 412 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 KCTD11Q693B1 232 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 CBLL1Q75N03 491 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 DPCDQ9BVM2 203 aaPredicted RBP15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 M0R3H8 397 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 SCO2O43819 266 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 ALG10Q5BKT4 473 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 SHFQ7M4L6 423 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 B3GNT7Q8NFL0 401 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 OR5T2Q8NGG2 359 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 OR4K13Q8NH42 304 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 GTF2H4Q92759 462 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 MS4A4EQ96PG1 132 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 B3GNT3Q9Y2A9 372 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 PCDHA9Q9Y5H5 950 aa15.28■□□□□ 0.04
HMGXB3-202ENST00000503427 BORCS7-ASMTA0A0B4J1R7 106 aa15.27■□□□□ 0.04
HMGXB3-202ENST00000503427 CDK3Q00526 305 aa15.27■□□□□ 0.04
HMGXB3-202ENST00000503427 GARNL3Q5VVW2 1013 aa15.27■□□□□ 0.04
HMGXB3-202ENST00000503427 LRFN4Q6PJG9 635 aa15.27■□□□□ 0.04
HMGXB3-202ENST00000503427 ZNF767PQ75MW2 155 aa15.27■□□□□ 0.04
HMGXB3-202ENST00000503427 ELMOD2Q8IZ81 293 aa15.27■□□□□ 0.04
HMGXB3-202ENST00000503427 NEIL2Q969S2 332 aa15.27■□□□□ 0.04
HMGXB3-202ENST00000503427 TMEM185BQ9H7F4 350 aa15.27■□□□□ 0.04
HMGXB3-202ENST00000503427 KLHL9Q9P2J3 617 aa15.27■□□□□ 0.04
HMGXB3-202ENST00000503427 ABLIM3O94929 683 aa15.27■□□□□ 0.04
HMGXB3-202ENST00000503427 FIP1L1Q6UN15 594 aaKnown RBP15.27■□□□□ 0.04
HMGXB3-202ENST00000503427 SAMD8Q96LT4 415 aa15.27■□□□□ 0.04
HMGXB3-202ENST00000503427 C5AR2Q9P296 337 aa15.27■□□□□ 0.04
HMGXB3-202ENST00000503427 ANKMY1Q9P2S6 941 aa15.27■□□□□ 0.04
HMGXB3-202ENST00000503427 FMO6PO60774 539 aa15.27■□□□□ 0.03
HMGXB3-202ENST00000503427 CDNFQ49AH0 187 aa15.27■□□□□ 0.03
HMGXB3-202ENST00000503427 HAGHLQ6PII5 290 aaPredicted RBP15.27■□□□□ 0.03
HMGXB3-202ENST00000503427 TMEM205Q6UW68 189 aa15.27■□□□□ 0.03
HMGXB3-202ENST00000503427 ZNF765Q7L2R6 523 aa15.27■□□□□ 0.03
HMGXB3-202ENST00000503427 GABRR3A8MPY1 467 aa15.27■□□□□ 0.03
HMGXB3-202ENST00000503427 C12orf71A8MTZ7 269 aa15.27■□□□□ 0.03
HMGXB3-202ENST00000503427 HIDE1A8MVS5 230 aa15.27■□□□□ 0.03
HMGXB3-202ENST00000503427 COL28A1Q2UY09 1125 aa15.27■□□□□ 0.03
HMGXB3-202ENST00000503427 DEFB126Q9BYW3 111 aa15.27■□□□□ 0.03
HMGXB3-202ENST00000503427 OR51E2Q9H255 320 aa15.27■□□□□ 0.03
HMGXB3-202ENST00000503427 PPIL3Q9H2H8 161 aaKnown RBP15.27■□□□□ 0.03
HMGXB3-202ENST00000503427 SLC39A1Q9NY26 324 aa15.27■□□□□ 0.03
HMGXB3-202ENST00000503427 ADAMTS7Q9UKP4 1686 aa15.27■□□□□ 0.03
HMGXB3-202ENST00000503427 MROH6A6NGR9 719 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 TRAPPC6AO75865 159 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 PROS1P07225 676 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 KIR2DS3Q14952 304 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 BEST3Q8N1M1 668 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 ZFP90Q8TF47 636 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 SLC6A7Q99884 636 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 HOXD1Q9GZZ0 328 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 LMAN1LQ9HAT1 526 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 KCNN3Q9UGI6 736 aa15.26■□□□□ 0.03
HMGXB3-202ENST00000503427 A0A0U1RQS6 177 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms