RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 WASHC1A8K0Z3 465 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 PRAMEF26H0Y7S4 382 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 DSCR3O14972 297 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 PRKYO43930 277 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 SNX4O95219 450 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 EML2O95834 649 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 DBIP07108 87 aaKnown RBP11.2□□□□□ -0.62
NUP54-202ENST00000502850 ACP2P11117 423 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 GLULP15104 373 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 TPMTP51580 245 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 DEFA1P59665 94 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 DEFA3P59666 94 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 SKP1P63208 163 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 MN1Q10571 1320 aaPredicted RBP11.2□□□□□ -0.62
NUP54-202ENST00000502850 DUSP8Q13202 625 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 GPR18Q14330 331 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 PERM1Q5SV97 790 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 FBXO42Q6P3S6 717 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 FRRS1Q6ZNA5 592 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 MBOAT2Q6ZWT7 520 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 RNF44Q7L0R7 432 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 OOSP2Q86WS3 158 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 VRK2Q86Y07 508 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 CDRT4Q8N9R6 151 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 ZCCHC10Q8TBK6 192 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 KAT2AQ92830 837 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 CEP19Q96LK0 163 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 ZNF582Q96NG8 517 aaPredicted RBP11.2□□□□□ -0.62
NUP54-202ENST00000502850 STACQ99469 402 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 WFDC6Q9BQY6 131 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 CDADC1Q9BWV3 514 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 NUAK2Q9H093 628 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 PIGUQ9H490 435 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 POLE3Q9NRF9 147 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 TAS2R16Q9NYV7 291 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 TESQ9UGI8 421 aaKnown RBP11.2□□□□□ -0.62
NUP54-202ENST00000502850 PILRAQ9UKJ1 303 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 SLC6A14Q9UN76 642 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 C19orf53Q9UNZ5 99 aaPredicted RBP11.2□□□□□ -0.62
NUP54-202ENST00000502850 HYKKA2RU49 373 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 OR6C74A6NCV1 312 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 CPSF4LA6NMK7 179 aaKnown RBP11.2□□□□□ -0.62
NUP54-202ENST00000502850 SCAMP1O15126 338 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 TPST2O60704 377 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 SEMA4FO95754 770 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 PTTG1O95997 202 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 ATP1B1P05026 303 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 HMGN1P05114 100 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 POLR2CP19387 275 aaPredicted RBP11.2□□□□□ -0.62
NUP54-202ENST00000502850 TGM1P22735 817 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 ACSL1P33121 698 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 GRK5P34947 590 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 TGFBR1P36897 503 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 AVPR1BP47901 424 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 PSMD7P51665 324 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 CCR5P51681 352 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 PDX1P52945 283 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 EFNB1P98172 346 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 RUNX1T1Q06455 604 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 CDC20Q12834 499 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 LTB4RQ15722 352 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 SSX1Q16384 188 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 DEFB134Q4QY38 66 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 ZNF628Q5EBL2 1059 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 AGAP7PQ5VUJ5 663 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 FCRL6Q6DN72 434 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 RPL13AP3Q6NVV1 102 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 FAM111BQ6SJ93 734 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 BTLAQ7Z6A9 289 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 ABI3BPQ7Z7G0 1075 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 ZNF619Q8N2I2 560 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 IQCF1Q8N6M8 205 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 AVL9Q8NBF6 648 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 OR7G2Q8NG99 324 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 OR52I1Q8NGK6 324 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 OR10G6Q8NH81 332 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 BAHD1Q8TBE0 780 aaPredicted RBP11.2□□□□□ -0.62
NUP54-202ENST00000502850 FAM174AQ8TBP5 190 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 GPBAR1Q8TDU6 330 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 SLC9A6Q92581 669 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 CDS1Q92903 461 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 SLC35A4Q96G79 324 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 SLC41A3Q96GZ6 507 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 MCHR1Q99705 422 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 CCDC32Q9BV29 185 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 HHATLQ9HCP6 504 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 DUSP22Q9NRW4 184 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 SEMA4GQ9NTN9 838 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 C14orf105Q9NVL8 296 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 MMP17Q9ULZ9 603 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 KCNE3Q9Y6H6 103 aa11.2□□□□□ -0.62
NUP54-202ENST00000502850 TCRBV21S2A2A0A5A6 115 aa11.19□□□□□ -0.62
NUP54-202ENST00000502850 KDM4EB2RXH2 506 aaPredicted RBP11.19□□□□□ -0.62
NUP54-202ENST00000502850 ZNF670-ZNF695F2Z2N8 137 aa11.19□□□□□ -0.62
NUP54-202ENST00000502850 H0Y8X5 98 aa11.19□□□□□ -0.62
NUP54-202ENST00000502850 STK25O00506 426 aa11.19□□□□□ -0.62
NUP54-202ENST00000502850 PLOD3O60568 738 aa11.19□□□□□ -0.62
NUP54-202ENST00000502850 FMO6PO60774 539 aa11.19□□□□□ -0.62
NUP54-202ENST00000502850 COQ9O75208 318 aa11.19□□□□□ -0.62
NUP54-202ENST00000502850 STX11O75558 287 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms