RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 FAM153BP0C7A2 387 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 ZNF708P17019 499 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 TCEA1P23193 301 aaKnown RBP10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 EVI2BP34910 448 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 MC3RP41968 323 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 CCT5P48643 541 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 LHX2P50458 406 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 FOXA1P55317 472 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 DSCR4P56555 118 aaPredicted RBP10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 FOXF2Q12947 444 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 BCL2A1Q16548 175 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 DECR1Q16698 335 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 CCDC153Q494R4 210 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 FAM153CQ494X1 144 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 FAM71E1Q6IPT2 247 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 TMEM107Q6UX40 140 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 IKBIPQ70UQ0 350 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 TRIM46Q7Z4K8 759 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 P4HA3Q7Z4N8 544 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 ADGRE4PQ86SQ3 457 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 LUZP2Q86TE4 346 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 TGIF2LYQ8IUE0 185 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 OR4N2Q8NGD1 307 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 RNF138Q8WVD3 245 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 DACH2Q96NX9 599 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 Q9N2J8 555 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 MYNNQ9NPC7 610 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 DDX18Q9NVP1 670 aaKnown RBP10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 TAS2R7Q9NYW3 318 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 CLCF1Q9UBD9 225 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 ABCG2Q9UNQ0 655 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 C19orf53Q9UNZ5 99 aaPredicted RBP10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 ANKHD1Q8IWZ3 2542 aaKnown RBP10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 MED12Q93074 2177 aa10.66□□□□□ -0.7
NUDCD3-211ENST00000497978 A0A1W2PPM1 405 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 G3V2L1 256 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 UBFD1O14562 309 aaKnown RBP10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 CASKO14936 926 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 SCO2O43819 266 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 ZIC3O60481 467 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 RSL1D1O76021 490 aaKnown RBP10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 RAF1P04049 648 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 PEPDP12955 493 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 GAS1P54826 345 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 PSMD4P55036 377 aaKnown RBP10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 CLDN18P56856 261 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 EEFSECP57772 596 aaKnown RBP10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 DNAJB13P59910 316 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 PSG6Q00889 435 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 KEAP1Q14145 624 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 GANABQ14697 944 aaKnown RBP10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 OR2A2Q6IF42 318 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 PAMR1Q6UXH9 720 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 FRMD7Q6ZUT3 714 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 GCNT2Q8N0V5 402 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 MEIOBQ8N635 442 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 CCDC63Q8NA47 563 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 MZB1Q8WU39 189 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 MBD6Q96DN6 1003 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 METTL2AQ96IZ6 378 aaKnown RBP10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 ALPK1Q96QP1 1244 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 TXLNGYQ9BZA5 131 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 DSN1Q9H410 356 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 PTGES2Q9H7Z7 377 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 PPCSQ9HAB8 311 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 C3orf14Q9HBI5 128 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 GALNT8Q9NY28 637 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 NDRG3Q9UGV2 375 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 PACSIN3Q9UKS6 424 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 EMCNQ9ULC0 261 aa10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 POLR3HQ9Y535 204 aaPredicted RBP10.65□□□□□ -0.7
NUDCD3-211ENST00000497978 AKAP9Q99996 3911 aa10.65□□□□□ -0.71
NUDCD3-211ENST00000497978 SH3D21A4FU49 640 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 SLC22A20A6NK97 555 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 TTC36A6NLP5 189 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 LINC01387J3KSC0 135 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 UPK1AO00322 258 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 SEC22BO75396 215 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 PROCP04070 461 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 CRHP06850 196 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 UROSP10746 265 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 HK1P19367 917 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 KLK2P20151 261 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 RAET1LQ5VY80 246 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 NOXRED1Q6NXP6 359 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 UBQLNLQ8IYU4 475 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 OR2L13Q8N349 312 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 FADS6Q8N9I5 356 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 OR2M3Q8NG83 312 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 UBLCP1Q8WVY7 318 aaPredicted RBP10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 ELP4Q96EB1 424 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 AMDHD1Q96NU7 426 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 G6PC3Q9BUM1 346 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 IQCGQ9H095 443 aaKnown RBP10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 GLIPR2Q9H4G4 154 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 FAM120CQ9NX05 1096 aaKnown RBP10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 PRRC2AP48634 2157 aaKnown RBP10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 AKAP6Q13023 2319 aa10.64□□□□□ -0.71
NUDCD3-211ENST00000497978 CELSR1Q9NYQ6 3014 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms