RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 PSMC3P17980 439 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 NT5EP21589 574 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 GALP22466 123 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 CA4P22748 312 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 EDNRAP25101 427 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 ALDH4A1P30038 563 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 SFTPDP35247 375 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 ATP5OP48047 213 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 GLUD2P49448 558 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 CEBPDP49716 269 aaPredicted RBP2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 MTTPP55157 894 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 ISL1P61371 349 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 HERV-K104P61576 105 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 HERV-K104P63124 156 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 NAAAQ02083 359 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 PLP2Q04941 152 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 SPAG1Q07617 926 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 TRAF3Q13114 568 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 RIGQ13278 110 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 GTF2H2Q13888 395 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 DHX34Q14147 1143 aaKnown RBP2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 SELPLGQ14242 412 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 DMC1Q14565 340 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 OPCMLQ14982 345 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 EXOSC7Q15024 291 aaKnown RBP2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 CDKN3Q16667 212 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 ODF3L2Q3SX64 289 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 LINC01620Q4KN68 170 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 MPPE1Q53F39 396 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 FNBP1LQ5T0N5 605 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 STXBP5Q5T5C0 1151 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 NDUFAF5Q5TEU4 345 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 C1orf189Q5VU69 101 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 MIS18BP1Q6P0N0 1132 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 GTF2H2CQ6P1K8 395 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 TTC27Q6P3X3 843 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 LEG1Q6P5S2 330 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 FIP1L1Q6UN15 594 aaKnown RBP2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 GOLGA7Q7Z5G4 137 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF554Q86TJ5 538 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 CTAGE6Q86UF2 777 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 SATL1Q86VE3 508 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 CDR2LQ86X02 465 aaPredicted RBP2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 KMT5CQ86Y97 462 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 TMEM139Q8IV31 216 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 LGI2Q8N0V4 545 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 MUC20Q8N307 709 aaPredicted RBP2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 LRRC43Q8N309 656 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 MARVELD2Q8N4S9 558 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 FAM89BQ8N5H3 189 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 BHLHE23Q8NDY6 225 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 CHDHQ8NE62 594 aaPredicted RBP2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 OR2T12Q8NG77 320 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 OR6C4Q8NGE1 309 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 OR4L1Q8NH43 312 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 OR52J3Q8NH60 311 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 SPRYD4Q8WW59 207 aaPredicted RBP2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 METTL21AQ8WXB1 218 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 HIST1H2ACQ93077 130 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 MRPL53Q96EL3 112 aaKnown RBP2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 STAMBPL1Q96FJ0 436 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 SCMH1Q96GD3 660 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 DHTKD1Q96HY7 919 aaPredicted RBP2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 IGSF21Q96ID5 467 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 C4orf45Q96LM5 186 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 RAB40CQ96S21 281 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 DCTN5Q9BTE1 182 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 DCLK3Q9C098 648 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 OR2B2Q9GZK3 357 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 IL25Q9H293 177 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 EBF3Q9H4W6 596 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 GAREM1Q9H706 876 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 DCLRE1BQ9H816 532 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 APOBEC3GQ9HC16 384 aaKnown RBP2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 CRLF2Q9HC73 371 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZFP14Q9HCL3 533 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 CHST11Q9NPF2 352 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 HPS4Q9NQG7 708 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF71Q9NQZ8 489 aaPredicted RBP2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 OLFML3Q9NRN5 406 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 RGS18Q9NS28 235 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 OR6C2Q9NZP2 312 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 KLHL8Q9P2G9 620 aaPredicted RBP2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 P2RX2Q9UBL9 471 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 BCAP29Q9UHQ4 241 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 ELF5Q9UKW6 265 aaPredicted RBP2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 FZD10Q9ULW2 581 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 STUB1Q9UNE7 303 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 SNX6Q9UNH7 406 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 OR2W1Q9Y3N9 320 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 C2CD2Q9Y426 696 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 HS3ST3B1Q9Y662 390 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 STAB2Q8WWQ8 2551 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 DYNC2H1Q8NCM8 4307 aaKnown RBP2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 VWA8A3KMH1 1905 aa2.17□□□□□ -2.06
CKS1BP2-201ENST00000497342 ABCA13Q86UQ4 5058 aa2.16□□□□□ -2.06
CKS1BP2-201ENST00000497342 IGLV5-37A0A075B6J1 123 aa2.16□□□□□ -2.06
CKS1BP2-201ENST00000497342 LOC105371242A0A075B767 164 aa2.16□□□□□ -2.06
CKS1BP2-201ENST00000497342 LOC101059948A0A1B0GTJ6 334 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms