RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ETV4P43268 484 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 GAS1P54826 345 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 ZNF844Q08AG5 666 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 GANABQ14697 944 aaKnown RBP14.3□□□□□ -0.12
HDAC4-213ENST00000496347 KRT71Q3SY84 523 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 GALNTL6Q49A17 601 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 VPS26BQ4G0F5 336 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 ATP6AP1LQ52LC2 224 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 AAGABQ6PD74 315 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 LRIG3Q6UXM1 1119 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 ZCCHC23Q6ZST2 131 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 ZNF551Q7Z340 670 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-213ENST00000496347 WDR53Q7Z5U6 358 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-213ENST00000496347 YRDCQ86U90 279 aaKnown RBP14.3□□□□□ -0.12
HDAC4-213ENST00000496347 OR4N2Q8NGD1 307 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 GFM2Q969S9 779 aaKnown RBP14.3□□□□□ -0.12
HDAC4-213ENST00000496347 CIDECQ96AQ7 238 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-213ENST00000496347 WDYHV1Q96HA8 205 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 CALHM2Q9HA72 323 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 SSU72Q9NP77 194 aaKnown RBP14.3□□□□□ -0.12
HDAC4-213ENST00000496347 NTMQ9P121 344 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 PPP4R1LQ9P1A2 415 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 ZNF629Q9UEG4 869 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-213ENST00000496347 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.3□□□□□ -0.12
HDAC4-213ENST00000496347 FBXL2Q9UKC9 423 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 MRPS18CQ9Y3D5 142 aaKnown RBP14.3□□□□□ -0.12
HDAC4-213ENST00000496347 V9GYY5 206 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-213ENST00000496347 TEP1Q99973 2627 aaKnown RBP14.3□□□□□ -0.12
HDAC4-213ENST00000496347 F8P00451 2351 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 MBD3L4A6NDZ8 208 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-213ENST00000496347 MBD3L3A6NE82 208 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-213ENST00000496347 MBD3L5A6NJ08 208 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-213ENST00000496347 SCAMP2O15127 329 aaKnown RBP14.29□□□□□ -0.12
HDAC4-213ENST00000496347 IL33O95760 270 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 IL2RAP01589 272 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 TUBBP07437 444 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 BCKDHAP12694 445 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 CAPN3P20807 821 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 GPC1P35052 558 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 ASCL1P50553 236 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 GFRA1P56159 465 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 TLE4Q04727 773 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 FBXL19-AS1Q494R0 122 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 ZNF385BQ569K4 471 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 ANKRD26P1Q6NSI1 321 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 LIX1LQ8IVB5 337 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 CDRT4Q8N9R6 151 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 NAXEQ8NCW5 288 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 OR4K17Q8NGC6 315 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 OR6Y1Q8NGX8 325 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 CLHC1Q8NHS4 586 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 MBD3L2Q8NHZ7 208 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-213ENST00000496347 ZPLD1Q8TCW7 415 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 AGR3Q8TD06 166 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 LRRC46Q96FV0 321 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 SFXN2Q96NB2 322 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 ZFP3Q96NJ6 502 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 HHATLQ9HCP6 504 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 RAB21Q9UL25 225 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 MED12LQ86YW9 2145 aa14.29□□□□□ -0.12
HDAC4-213ENST00000496347 C2orf72A6NCS6 295 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 H0Y3Z8 333 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 RGS16O15492 202 aaPredicted RBP14.28□□□□□ -0.12
HDAC4-213ENST00000496347 AKAP10O43572 662 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 SCO2O43819 266 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 KCNH1O95259 989 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 PRPS2P11908 318 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 CHMP24386 653 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 ARRB2P32121 409 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 SERPINB4P48594 390 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 MANFP55145 182 aaKnown RBP14.28□□□□□ -0.12
HDAC4-213ENST00000496347 PRR5P85299 388 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 MLC1Q15049 377 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 HRNRQ86YZ3 2850 aaPredicted RBP14.28□□□□□ -0.12
HDAC4-213ENST00000496347 FADS6Q8N9I5 356 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 RELL2Q8NC24 303 aaPredicted RBP14.28□□□□□ -0.12
HDAC4-213ENST00000496347 TNIP2Q8NFZ5 429 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 CEP70Q8NHQ1 597 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 TRIB1Q96RU8 372 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 PARD6BQ9BYG5 372 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 EQTNQ9NQ60 294 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 SDHAF3Q9NRP4 125 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 SH3BP4Q9P0V3 963 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 L3MBTL1Q9Y468 752 aa14.28□□□□□ -0.12
HDAC4-213ENST00000496347 AKAP6Q13023 2319 aa14.27□□□□□ -0.12
HDAC4-213ENST00000496347 TM9SF1O15321 606 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 FADS1O60427 444 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 SKAP2O75563 359 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-213ENST00000496347 LYPLA1O75608 230 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-213ENST00000496347 SNUPNO95149 360 aaKnown RBP14.27□□□□□ -0.13
HDAC4-213ENST00000496347 IL18BPO95998 194 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 NGFRP08138 427 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 CREB1P16220 341 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 BMP5P22003 454 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 DPP4P27487 766 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 MAP3K8P41279 467 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 CLK3P49761 638 aaKnown RBP14.27□□□□□ -0.13
HDAC4-213ENST00000496347 LHX2P50458 406 aa14.27□□□□□ -0.13
HDAC4-213ENST00000496347 DSCR4P56555 118 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-213ENST00000496347 GAB1Q13480 694 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms