RNA–Protein interactions for RNA: ENST00000496055.5

RABGGTB-213, Transcript of Rab geranylgeranyltransferase subunit beta, humanhuman

TSL 2

Gene RABGGTB, Length 3,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTB-213ENST00000496055 PCNPQ8WW12 178 aaKnown RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 GLMPQ8WWB7 406 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 TRIM51Q9BSJ1 452 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 ENKD1Q9H0I2 346 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 MMP25Q9NPA2 562 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 C14orf105Q9NVL8 296 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 C2orf42Q9NWW7 574 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 FBXL12Q9NXK8 326 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 UBP1Q9NZI7 540 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 GSKIPQ9P0R6 139 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 USP36Q9P275 1121 aaKnown RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 ASB1Q9Y576 335 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 SPTBN4Q9H254 2564 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 WDR81Q562E7 1941 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 TBC1D3DA0A087WVF3 549 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 TBC1D3IA0A087WXS9 549 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 TBC1D3EA0A087X179 549 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 TBC1D3KA0A087X1G2 549 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 A0A1B0GVM2 712 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 TBC1D3FA6NER0 549 aaPredicted RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 MPTX1A8MV57 137 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 TBC1D3LB9A6J9 549 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 PIK3R2O00459 728 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 BTN3A3O00478 584 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 STX7O15400 261 aaKnown RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 CYP26A1O43174 497 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 OIP5O43482 229 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 TBL1XO60907 577 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 STC2O76061 302 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 APRTP07741 180 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 TBC1D3HP0C7X1 549 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 ZSCAN5DPP0CG00 497 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 RRASP10301 218 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 C5AR1P21730 350 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 GLDCP23378 1020 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 ITGA3P26006 1051 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 ABCD3P28288 659 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 ERP29P30040 261 aaKnown RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 DDTP30046 118 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 CEACAM6P40199 344 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 KCNK10P57789 538 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 GK3PQ14409 553 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 ZNF234Q14588 700 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 P2RY14Q15391 338 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 MEP1AQ16819 746 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 C14orf28Q4W4Y0 310 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 TBC1D3GQ6DHY5 549 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 TBC1D3CQ6IPX1 549 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 CGB2Q6NT52 195 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 QSOX2Q6ZRP7 698 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 FAM83HQ6ZRV2 1179 aaPredicted RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 SPATA19Q7Z5L4 167 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 VRK2Q86Y07 508 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 CACUL1Q86Y37 369 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 TBC1D3Q8IZP1 549 aaPredicted RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 DNAJB14Q8TBM8 379 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 SLC35F5Q8WV83 523 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 CDS1Q92903 461 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 TMBIM1Q969X1 311 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 MED8Q96G25 268 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 COL21A1Q96P44 957 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 SPATA9Q9BWV2 254 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 CSNK1G1Q9HCP0 422 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 MKKSQ9NPJ1 570 aaPredicted RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 SAR1AQ9NR31 198 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 LATS2Q9NRM7 1088 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 SLC17A7Q9P2U7 560 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 SERTAD1Q9UHV2 236 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 DNPEPQ9ULA0 475 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 A0A1B0GW15 77 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 A0A1W2PQ09 198 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 SLC22A23A1A5C7 686 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 CXorf65A6NEN9 183 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 E7ESA3 106 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 GYG2O15488 501 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 CFLARO15519 480 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 MRPS14O60783 128 aaKnown RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 GADD45GO95257 159 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 CBX7O95931 251 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 PTTG1O95997 202 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 C4BPAP04003 597 aaKnown RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 SPNP16150 400 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 ANXA7P20073 488 aaKnown RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 CCNOP22674 350 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 DGKAP23743 735 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 CPT2P23786 658 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 DNASE1P24855 282 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 APEX1P27695 318 aaKnown RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 CD38P28907 300 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 CEACAM3P40198 252 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 KCNJ1P48048 391 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 CSNK1EP49674 416 aaKnown RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 RGS8P57771 180 aaPredicted RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 LSM11P83369 360 aaKnown RBP eCLIP4.3□□□□□ -1.726e-9■■□□□ 13.5
RABGGTB-213ENST00000496055 FKBP3Q00688 224 aaKnown RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 RING1Q06587 406 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 SNTB2Q13425 540 aaKnown RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 PTGR1Q14914 329 aa4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 TRIP4Q15650 581 aaPredicted RBP4.3□□□□□ -1.72
RABGGTB-213ENST00000496055 EXOC3L4Q17RC7 722 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms