RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 KCNRGQ8N5I3 272 aa4.52□□□□□ -1.69
PRKD3-210ENST00000494667 NETO2Q8NC67 525 aa4.52□□□□□ -1.69
PRKD3-210ENST00000494667 COQ8AQ8NI60 647 aa4.52□□□□□ -1.69
PRKD3-210ENST00000494667 NEIL3Q8TAT5 605 aa4.52□□□□□ -1.69
PRKD3-210ENST00000494667 STOML3Q8TAV4 291 aa4.52□□□□□ -1.69
PRKD3-210ENST00000494667 NR4A3Q92570 626 aa4.52□□□□□ -1.69
PRKD3-210ENST00000494667 EXT2Q93063 718 aa4.52□□□□□ -1.69
PRKD3-210ENST00000494667 MS4A4EQ96PG1 132 aa4.52□□□□□ -1.69
PRKD3-210ENST00000494667 LMAN2LQ9H0V9 348 aa4.52□□□□□ -1.69
PRKD3-210ENST00000494667 GPN1Q9HCN4 374 aaPredicted RBP4.52□□□□□ -1.69
PRKD3-210ENST00000494667 MRPS30Q9NP92 439 aaKnown RBP4.52□□□□□ -1.69
PRKD3-210ENST00000494667 MRPL17Q9NRX2 175 aaKnown RBP4.52□□□□□ -1.69
PRKD3-210ENST00000494667 MED17Q9NVC6 651 aa4.52□□□□□ -1.69
PRKD3-210ENST00000494667 PPP4R1LQ9P1A2 415 aa4.52□□□□□ -1.69
PRKD3-210ENST00000494667 TP53TG5Q9Y2B4 290 aa4.52□□□□□ -1.69
PRKD3-210ENST00000494667 PLEKHA6Q9Y2H5 1048 aa4.52□□□□□ -1.69
PRKD3-210ENST00000494667 RPH3AQ9Y2J0 694 aaPredicted RBP4.52□□□□□ -1.69
PRKD3-210ENST00000494667 DHRS7Q9Y394 339 aa4.52□□□□□ -1.69
PRKD3-210ENST00000494667 OR6C68A6NDL8 312 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 GLTPD2A6NH11 291 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 SLC9B1P1A6NJY1 282 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 LRRN3E7EW58 273 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 SSNA1O43805 119 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 ULK1O75385 1050 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 RBBP9O75884 186 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 ZNF865P0CJ78 1059 aaPredicted RBP4.51□□□□□ -1.69
PRKD3-210ENST00000494667 ZNF8P17098 575 aaPredicted RBP4.51□□□□□ -1.69
PRKD3-210ENST00000494667 VAMP1P23763 118 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 GIFP27352 417 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 POU3F4P49335 361 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 ERVK-25P63136 954 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 UGT8Q16880 541 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 GPRC6AQ5T6X5 926 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 OR5M10Q6IEU7 315 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 IL34Q6ZMJ4 242 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 Q6ZTK2 550 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 CLEC20AQ6ZU45 233 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 SLC36A1Q7Z2H8 476 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 AQP11Q8NBQ7 271 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 GPR156Q8NFN8 814 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 SLC7A13Q8TCU3 470 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 NUDT8Q8WV74 236 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 MTFMTQ96DP5 389 aaKnown RBP4.51□□□□□ -1.69
PRKD3-210ENST00000494667 CMSS1Q9BQ75 279 aaKnown RBP4.51□□□□□ -1.69
PRKD3-210ENST00000494667 SEMA6CQ9H3T2 930 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 LRRN3Q9H3W5 708 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 C1orf198Q9H425 327 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 IPPKQ9H8X2 491 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 CSNK1G1Q9HCP0 422 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 ACKR4Q9NPB9 350 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 NTMQ9P121 344 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 CFAP97Q9P2B7 532 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 ZNF282Q9UDV7 671 aaPredicted RBP4.51□□□□□ -1.69
PRKD3-210ENST00000494667 MRTO4Q9UKD2 239 aaKnown RBP4.51□□□□□ -1.69
PRKD3-210ENST00000494667 LOC105369274A0A096LPK9 316 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 OR6C75A6NL08 312 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 RFPL4AA6NLU0 287 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 RFPL4AL1F8VTS6 287 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 RPL36A-HNRNPH2H7BZ11 118 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 RNASET2O00584 256 aaKnown RBP4.51□□□□□ -1.69
PRKD3-210ENST00000494667 LATS1O95835 1130 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 INSRRP14616 1297 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 AMD1P17707 334 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 AP3S2P59780 193 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 PPIAP62937 165 aaKnown RBP4.51□□□□□ -1.69
PRKD3-210ENST00000494667 SEMG2Q02383 582 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 BCL2L1Q07817 233 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 ZNF630Q2M218 657 aaPredicted RBP4.51□□□□□ -1.69
PRKD3-210ENST00000494667 MPPE1Q53F39 396 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 ZNF805Q5CZA5 627 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 SFRP5Q5T4F7 317 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 ANXA8L1Q5VT79 327 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 C9orf57Q5W0N0 161 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 ABHD13Q7L211 337 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 FAM217AQ8IXS0 508 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 OR4N4Q8N0Y3 316 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 WDSUB1Q8N9V3 476 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 TBATAQ96M53 351 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 GPR21Q99679 349 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 TM6SF2Q9BZW4 377 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 CCDC86Q9H6F5 360 aaKnown RBP4.51□□□□□ -1.69
PRKD3-210ENST00000494667 ADARB2Q9NS39 739 aaKnown RBP4.51□□□□□ -1.69
PRKD3-210ENST00000494667 FLRT1Q9NZU1 646 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 STOX2Q9P2F5 926 aaPredicted RBP4.51□□□□□ -1.69
PRKD3-210ENST00000494667 DLGAP4Q9Y2H0 992 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 CRYL1Q9Y2S2 319 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 PCDHB1Q9Y5F3 818 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 MKRN2OSH3BPM6 223 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 PSMD9O00233 223 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 UGDHO60701 494 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 SEMA7AO75326 666 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 SERPINA5P05154 406 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 IQCF3P0C7M6 154 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 RNH1P13489 461 aaKnown RBP4.51□□□□□ -1.69
PRKD3-210ENST00000494667 HSD3B1P14060 373 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 HSD3B2P26439 372 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 ACADLP28330 430 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 AGTR1P30556 359 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 TTPAP49638 278 aa4.51□□□□□ -1.69
PRKD3-210ENST00000494667 CAPZA1P52907 286 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms